Query= MSMg01no412_h10.b1 MSMg01no412_h10.b1 CHROMAT_FILE:
MSMg01no412_h10.b1 PHD_FILE: MSMg01no412_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:50 2005
(533 letters)
>mm_chr19_18121605_18122537
Length = 933
Score = 998 bits (516), Expect = 0.0
Identities = 531/540 (98%), Gaps = 7/540 (1%)
Strand = Plus / Minus
Query: 1 cagagcgttaaaccaaggacagagcccttgtaaacatgaaatgttgtgtgattctaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cagagcgttaaaccaaggacagagcccttgtaaacatgaaatgttgtgtgattctaccca 813
Query: 61 ttgcatgaagcaggtgcgaggactatcagtgtttaggtactggctaagcctgaacatgag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ttgcatgaagcaggttcgaggactatcagtgtttaggtactggctaagcctgaacatgag 753
Query: 121 tgaagcagagaaagatccaggaagcaactgtctgccatcgcttccttagattcctgcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tgaagcagagaaagatccaggaagcaactgtctgccatcgcttccttagattcctgcttg 693
Query: 181 agttcctggttgacttccctcaacgatgaactgtgacc-------tgagccaagtaattc 233
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 692 agttcctggttgacttccctcaacgatgaactgtgacctgaggtatgagccaagtaattc 633
Query: 234 ctttcccccaaagttgcttttggtcagtgttttattatagcaccagaaaggaaactagag 293
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctttccccctaagttgcttttggtcagtgttttattatagcaccagaaaggaaactagag 573
Query: 294 agcttggcaaatgcagactcagattctaggtcaaggtcagcctagaacctagggttatgt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agcttggcaaatgcagactcagattctaggtcaaggtcagcctagaacctagggttatgt 513
Query: 354 attttatcaataaccccaaccattgaacactacaaattgaaccacagtgaattgccacta 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 attttatcaataaccccaaccattgaacactacaaattgaaccacagtgaattgccacta 453
Query: 414 caaaccatctacattatctaaaaacaaaaaccacacatacaagttacagggtcctgccag 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaaccatctacattatctaaaaacaaaaaccacacatacaagttacagggtcctgccag 393
Query: 474 aatgtgaatgtgaaattagaatccatatacttgtggcaagaatgtaaaataatatagaca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aatgtgaatgtgaaattagaatccatatacttgtggcaagaatgtaaaataatatagaca 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_h10.g1 MSMg01no412_h10.g1 CHROMAT_FILE:
MSMg01no412_h10.g1 PHD_FILE: MSMg01no412_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:50 2005
(458 letters)
>mm_chr19_17969176_17970033
Length = 858
Score = 832 bits (430), Expect = 0.0
Identities = 451/458 (98%)
Strand = Plus / Plus
Query: 1 agatagttaatagaatggggcaatagtaggagcgatcaatttcctcaatttctatccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatagttaatagaatggggcaatagtaggagcgatcaatttcctcaatttctatccatt 260
Query: 61 aagtctgagaaaagttcccctaagaacatagcaaaacattaaaaaaatattgaacattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtctgagaaaagttcccctaagaacatagcaaaacattaaaaaaatattgaacattga 320
Query: 121 agcatcattcagaataccaaaatgcaagttcattgcagttatgttccataattagcctta 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 agcatcattcagaataccaaaatgcaagtacattgcagttatgttccataattagcctta 380
Query: 181 tggcaaatgctactgagagcatagagcacttttcagcatccagggcagtgaatagtgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcaaatgctactgagagcatagagcacttttcagcatccagggcagtgaatagtgctg 440
Query: 241 ttatttattaaaagatataactgggctatgctttagaaccatcaaaaacttaaaaatttt 300
||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||
Sbjct: 441 ctatttattaaaagatataagtggactatgctttagaaaaaccaaaaacttaaaaatttt 500
Query: 301 ccagatcaattgagtagagcttgcgtggtttctttgggatctgagaaatgttactttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagatcaattgagtagagcttgcgtggtttctttgggatctgagaaatgttactttgta 560
Query: 361 taaacagctgttttgccaaaagacatcttgaaatattgatttcaagtaccttaaatctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaacagctgttttgccaaaagacatcttgaaatattgatttcaagtaccttaaatctgt 620
Query: 421 attttattttatcccataaatctttcttttcccattca 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attttattttatcccataaatctttcttttcccattca 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
