MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-413I18
Chromosome	19 (Build37)
Map Location	38,002,801 - 38,193,680
singlet/doublet	doublet
Overlap gene	Fer1l3, Cep55, Gpr120, Rbp4
Upstream gene	Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex, Exoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281
Downstream gene	Pde6c, 5730455O13Rik, Lgi1, Tmem20, LOC100042483, Plce1, EG667587, Noc3l, Tbc1d12, Hells, LOC209753, Cyp2c55, LOC100042507, Cyp2c65, LOC668278, Cyp2c66
Link	Open Mouse BAC browser

Click to get alignment info.

name	Btaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107182 MGI:2147538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpeb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208922 MGI:2443075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	March5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69104 MGI:1915207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668230 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ide (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15925 MGI:96412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 503 ESTs, 10 Proteins pseudo : _no_value

name	Kif11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16551 MGI:1098231
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667490 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667490 MGI:3648745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC631069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 103 ESTs, 6 Proteins pseudo : _no_value

name	Hhex (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15242 MGI:96086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107371 MGI:1351611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp26c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546726 MGI:2679699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	Cyp26a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13082 MGI:1096359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668248 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC668251 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668251
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 131 ESTs, 48 Proteins pseudo : _no_value

name	LOC209281 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:209281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Fer1l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226101 MGI:1919192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 162 ESTs, 12 Proteins

name	Cep55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74107 MGI:1921357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr120 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107221 MGI:2147577
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19662 MGI:97879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde6c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110855 MGI:105956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730455O13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70567 MGI:1917817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56839 MGI:1861691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240660 MGI:2444789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042483 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Plce1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74055 MGI:1921305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667587 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667587 MGI:3644350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 150 ESTs, 15 Proteins

name	Noc3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57753 MGI:1932610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209478 MGI:2384803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hells (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15201 MGI:106209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC209753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:209753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	Cyp2c55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72082 MGI:1919332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042507 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Cyp2c65 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72303 MGI:1919553
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668278 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cyp2c66 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69888 MGI:1917138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123858773 GeneID:107182 MGI:2147538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) transcript_id : NM_001080706.1

name	Cpeb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370379 GeneID:208922 MGI:2443075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylation element binding protein 3 transcript_id : NM_198300.2

name	March5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734464 GeneID:69104 MGI:1915207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane-associated ring finger (C3HC4) 5 transcript_id : NM_027314.2

name	Ide (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583921 GeneID:15925 MGI:96412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin degrading enzyme transcript_id : NM_031156.2

name	Kif11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45476576 GeneID:16551 MGI:1098231
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 11 transcript_id : NM_010615.1

name	Hhex (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802813 GeneID:15242 MGI:96086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hematopoietically expressed homeobox transcript_id : NM_008245.3

name	Exoc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62526125 GeneID:107371 MGI:1351611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 6 transcript_id : NM_175353.2

name	Cyp26c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82998686 GeneID:546726 MGI:2679699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : cytochrome P450, family 26, subfamily c, polypeptide 1 transcript_id : XM_621503.2

name	Cyp26a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681100 GeneID:13082 MGI:1096359
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 26, subfamily a, polypeptide 1 transcript_id : NM_007811.1

name	Fer1l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270525 GeneID:226101 MGI:1919192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 159 ESTs, 11 Proteins product : fer-1-like 3, myoferlin (C. elegans), transcript variant 1 transcript_id : XM_283556.7

name	Cep55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31745190 GeneID:74107 MGI:1921357
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 55 transcript_id : NM_028760.1

name	Gpr120 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130700 GeneID:107221 MGI:2147577
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 120 transcript_id : NM_181748.2

name	Rbp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990164 GeneID:19662 MGI:97879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinol binding protein 4, plasma transcript_id : NM_011255.2

name	Pde6c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809035 GeneID:110855 MGI:105956
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 6C, cGMP specific, cone, alpha prime transcript_id : NM_033614.1

name	5730455O13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486728 GeneID:70567 MGI:1917817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730455O13 gene transcript_id : NM_001081075.1

name	Lgi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734452 GeneID:56839 MGI:1861691
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat LGI family, member 1 transcript_id : NM_020278.2

name	Tmem20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130276 GeneID:240660 MGI:2444789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 20 transcript_id : NM_175507.3

name	LOC100042483 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270457 GeneID:100042483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : similar to cyclin-dependent kinase inhibitor 2A transcript_id : XM_001478298.1

name	Plce1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053942 GeneID:74055 MGI:1921305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase C, epsilon 1 transcript_id : NM_019588.2

name	EG667587 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405909 GeneID:667587 MGI:3644350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 150 ESTs, 15 Proteins product : predicted gene, EG667587 transcript_id : XM_001001296.1

name	Noc3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956107 GeneID:57753 MGI:1932610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar complex associated 3 homolog (S. cerevisiae) transcript_id : NM_021315.1

name	Tbc1d12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119943132 GeneID:209478 MGI:2384803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1D12: TBC1 domain family, member 12 transcript_id : NM_145952.3

name	Hells (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299599 GeneID:15201 MGI:106209
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase, lymphoid specific transcript_id : NM_008234.3

name	Cyp2c55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803086 GeneID:72082 MGI:1919332
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily c, polypeptide 55 transcript_id : NM_028089.2

name	LOC100042507 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270461 GeneID:100042507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 transcript_id : XM_001478337.1

name	Cyp2c65 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58696419 GeneID:72303 MGI:1919553
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily c, polypeptide 65 transcript_id : NM_028191.1

name	Cyp2c66 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58743309 GeneID:69888 MGI:1917138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily c, polypeptide 66 transcript_id : NM_001011707.1

name	Btaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123858774 GeneID:107182 MGI:2147538
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 note : TBP-associated factor 170 product : BTAF1 RNA polymerase II, B-TFIID transcription factor-associated protein_id : NP_001074175.1

name	Cpeb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370380 CCDS:CCDS29775.1 GeneID:208922 MGI:2443075
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytoplasmic polyadenylation element binding protein 3 protein_id : NP_938042.2

name	March5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734465 CCDS:CCDS29776.1 GeneID:69104 MGI:1915207
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ring finger protein 153 product : membrane-associated ring finger (C3HC4) 5 protein_id : NP_081590.2

name	Ide (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583922 GeneID:15925 MGI:96412
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004231 - insulysin activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : insulin degrading enzyme protein_id : NP_112419.2

name	Kif11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45476577 CCDS:CCDS29777.1 GeneID:16551 MGI:1098231
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0007100 - mitotic centrosome separation [Evidence IMP] codon_start : 1 note : kinesin 11; kinesin-like 1 product : kinesin family member 11 protein_id : NP_034745.1

name	Hhex (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680219 CCDS:CCDS29778.1 GeneID:15242 MGI:96086
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0035050 - embryonic heart tube development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001889 - liver development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : hematopoietically expressed homeobox, related sequence 2 product : hematopoietically expressed homeobox protein_id : NP_032271.1

name	Exoc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526126 CCDS:CCDS29779.1 GeneID:107371 MGI:1351611
definition	GO_component : GO:0000145 - exocyst [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA] codon_start : 1 note : SEC15 homolog; SEC15-like 1; hemoglobin deficient product : exocyst complex component 6 protein_id : NP_780562.2

name	Cyp26c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998687 GeneID:546726 MGI:2679699
definition	codon_start : 1 product : predicted gene, EG546726 protein_id : XP_621503.2

name	Cyp26a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681101 CCDS:CCDS29780.1 GeneID:13082 MGI:1096359
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0042573 - retinoic acid metabolism [Evidence IMP] codon_start : 1 exception : mismatches in translation function : metabolises retinoic acid note : cytochrome P450, 26, retinoic acid; retinoic acid hydrolase; cytochrome P450, 26, retinoic acid A1 product : cytochrome P450, family 26, subfamily a, polypeptide 1 protein_id : NP_031837.1

name	Fer1l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270526 GeneID:226101 MGI:1919192
definition	codon_start : 1 product : myoferlin isoform 1 protein_id : XP_283556.7

name	Cep55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31745191 CCDS:CCDS29782.1 GeneID:74107 MGI:1921357
definition	GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : centrosomal protein 55 protein_id : NP_083036.1

name	Gpr120 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32306532 CCDS:CCDS29783.1 GeneID:107221 MGI:2147577
definition	GO_component : GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005504 - fatty acid binding [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IDA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0046879 - hormone secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein-coupled receptor GT01 product : G protein-coupled receptor 120 protein_id : NP_861413.1

name	Rbp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859612 CCDS:CCDS29784.1 GeneID:19662 MGI:97879
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016918 - retinal binding [Evidence IEA]; GO:0005501 - retinoid binding [Evidence IEA]; GO:0019841 - retinol binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : retinol binding protein 4, cellular product : retinol binding protein 4, plasma protein_id : NP_035385.1

name	Pde6c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809036 GeneID:110855 MGI:105956
definition	GO_function : GO:0047555 - 3',5'-cyclic-GMP phosphodiesterase activity [Evidence IEA] GO_process : GO:0050896 - response to stimulus [Evidence IEA] codon_start : 1 product : phosphodiesterase 6C, cGMP specific, cone, alpha prime protein_id : NP_291092.1

name	5730455O13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486729 GeneID:70567 MGI:1917817
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70567 protein_id : NP_001074544.1

name	Lgi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9938002 CCDS:CCDS29786.1 GeneID:56839 MGI:1861691
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : leucine-rich, glioma inactivated 1 product : leucine-rich repeat LGI family, member 1 protein_id : NP_064674.1

name	Tmem20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425262 CCDS:CCDS29787.1 GeneID:240660 MGI:2444789
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 20 protein_id : NP_780716.1

name	LOC100042483 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270458 GeneID:100042483
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478348.1

name	Plce1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053943 GeneID:74055 MGI:1921305
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0004435 - phosphoinositide phospholipase C activity [Evidence ISS] GO_process : GO:0000187 - activation of MAPK activity [Evidence ISS]; GO:0019722 - calcium-mediated signaling [Evidence ISS]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence ISS]; GO:0006651 - diacylglycerol biosynthesis [Evidence ISS]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0007200 - G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence ISS]; GO:0007507 - heart development [Evidence ISS]; GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence ISS]; GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0045859 - regulation of protein kinase activity [Evidence ISS]; GO:0046578 - regulation of Ras protein signal transduction [Evidence ISS]; GO:0006940 - regulation of smooth muscle contraction [Evidence ISS]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : phospholipase C, epsilon protein_id : NP_062534.2

name	EG667587 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405910 GeneID:667587 MGI:3644350
definition	codon_start : 1 product : similar to Chain M, Ap2 Clathrin Adaptor Core protein_id : XP_001001296.1

name	Noc3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956108 GeneID:57753 MGI:1932610
definition	GO_component : GO:0016607 - nuclear speck [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045444 - fat cell differentiation [Evidence IMP] codon_start : 1 exception : mismatches in translation product : nucleolar complex associated 3 homolog protein_id : NP_067290.1

name	Tbc1d12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119943133 GeneID:209478 MGI:2384803
definition	codon_start : 1 product : TBC1D12: TBC1 domain family, member 12 protein_id : NP_666064.3

name	Hells (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12232371 CCDS:CCDS29789.1 GeneID:15201 MGI:106209
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0004386 - helicase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006342 - chromatin silencing [Evidence IMP]; GO:0006306 - DNA methylation [Evidence IMP]; GO:0030098 - lymphocyte differentiation [Evidence TAS]; GO:0001655 - urogenital system development [Evidence IMP] codon_start : 1 note : proliferation-associated SNF2-like product : helicase, lymphoid specific protein_id : NP_032260.2

name	Cyp2c55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386282 CCDS:CCDS29790.1 GeneID:72082 MGI:1919332
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA] codon_start : 1 note : cytochrome P450, 2c55 product : cytochrome P450, family 2, subfamily c, polypeptide 55 protein_id : NP_082365.1

name	LOC100042507 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270462 GeneID:100042507
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478387.1

name	Cyp2c65 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58696420 CCDS:CCDS29791.1 GeneID:72303 MGI:1919553
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 2c65 product : cytochrome P450, family 2, subfamily c, polypeptide 65 protein_id : NP_082467.1

name	Cyp2c66 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58743310 CCDS:CCDS29792.1 GeneID:69888 MGI:1917138
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 2c66 product : cytochrome P450, family 2, subfamily c, polypeptide 66 protein_id : NP_001011707.1

name	LOC668230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668230
definition	number : 1 pseudo : _no_value

name	LOC668248 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668248
definition	number : 1 pseudo : _no_value

name	LOC209281 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209281
definition	number : 1 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 1 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 2 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 3 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 4 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 5 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 6 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 7 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 8 pseudo : _no_value

name	LOC209753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209753
definition	number : 9 pseudo : _no_value

name	LOC668278 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668278
definition	number : 1 pseudo : _no_value

name	LOC100043010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270521 GeneID:100043010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 503 ESTs, 10 Proteins product : similar to QM protein pseudo : _no_value transcript_id : XR_034211.1

name	EG667490 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94405904 GeneID:667490 MGI:3648745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG667490 pseudo : _no_value transcript_id : XR_002172.1

name	LOC631069 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270522 GeneID:631069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 103 ESTs, 6 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_034216.1

name	LOC668251 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270450 GeneID:668251
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 131 ESTs, 48 Proteins product : similar to P26s4 pseudo : _no_value transcript_id : XR_033613.1

clone name	MSMg01-371K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119N11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-339C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-274J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-404I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-416D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436G17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-413I18.T7 (MSMg01no413_i18.b1)	MSMg01-413I18.TJ (MSMg01no413_i18.g1)
ACC	AG510056	AG510057
length	740	771
length of high quality (start - end)	249 (55 - 303)	429 (62 - 490)
definition	CHROMAT_FILE: MSMg01no413_i18.b1 PHD_FILE: MSMg01no413_i18.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:16 2005	CHROMAT_FILE: MSMg01no413_i18.g1 PHD_FILE: MSMg01no413_i18.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:16 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(38,002,801 - 38,003,049)	(38,193,252 - 38,193,680)
sequence	CGCAATACGACTCACATATGCAGAAATCCGCGGAATCAAGTGCTTTGACA AACTGCCCCAGTCCCATGCGGCCTCATGCATCGTATCATATACATACATG CACTGTCCTTGGAGAAGCCATTTTGCTGAGTGCTGTTGACATGCTGCTTA AGCACTGGAATTGGAAGGCAACTGTTGAGTCGGCCATGAAAGAAGGTCTG CGCTGTCTGCCTGGCACTTGACCAATCTGCCCCACGCCCTCATCTCCTGC TCTTCTTCGGAGAGTGCTAAGCTCATCCGTCACGAGTTCCCACAGACATC ACATTTTTGTGATGCCCTCGTGGAAAGACTCGGCCTCCAGCCCTCAGCAA CAGCAGTTAGTGTGGGCCCATTCGGTTTATTCAGGTAAAAAGTCTAAAAT CAAGTTAGCGGTCATATGTGTCCATTACATGTACGCATGCTACATGTAAT AAAGGACGTTAGTAAGCTTGTCATTGGCTCTCCCGAAGTTCCACGCTGCT CACTGGACTTTATAGAAATATGCAATGTCTACCTTGACTAAGGGACTTGA GAGCTTATAGGAGATCCCACCTTTTCTTGTTGACACAGTGTCCCTCAACT AACGCACGATGTCAGCAGGCTGATTATGGTCATTTATCGTGTACCGTTTA TGACTTGACCCCATCATCTCTAGACCTGCTTCTCTTCCCGGCCCCCAGTT TATACCCTCGGACCCTTTCATCGTGTCGCGCTAGACCACC	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXAGGTCCTTATGCTTGCAGAGTAAACACAATTACCCACTG GGCTATATCTCCTTAACAACCCTGCCCACTCCAAATACAAATTCTAATGA GTATTTGAAGCTGGATAGTGAGCATCTTTTGCCCCTAGGCATCCCAGTTG TCAACCGGAGGAAGTGAATAGGATGCCTAAGCGTGAATCAGGGTAGAGCC TGAAAAACTATTACCATCTGATTGGCATCCTCTAGCCCACCCAATAGGAA AACAGTGGGGCTAAGAGAGACGGGGGGTGGGGTAGATTCTGTGGAGCATT GATAAGTCGTGACCTCGAGTTGTTGGTGGCATAAGTTGAGGGCGATAGAC ATTAGACAGAGACACATGTTATTGGAGGGTGTAGTAGTGAAGACAGTAGT ACAGCTGCAGGGGTCCTTTAGAAAAGCATTGTGCTATCAGTTATCAAGAA GCTGACGACGTGAATGAGGGGCCCTCTATATCAGGACAAGATTTGTGTCT TCTGCTACCAAGGAAACACTGAAATGAAGGACTGTCTTCTGTGCCATGAA ACTTTTTCGGTAAAAAAAAAAGAACCTTTTCCCCTCTGCCCAGTGGTTCA ATTCTTTCAGGAAATTCTGTGGCTTCTTTTACCTAAAGAAAGGGTGGGTG TTCTTGGCGTGTTTTTTACATACTTTTATTGTCCCTCTCTTTCCATTTTT CCTCCTTTATTATATTCAAAA
quality values	Open. Hide. 9 13 8 8 8 10 10 9 9 11 19 12 8 8 8 8 7 7 7 8 7 9 9 7 8 8 9 10 13 12 23 16 21 15 8 8 8 17 21 30 39 21 17 6 7 6 6 6 6 9 9 9 9 13 21 32 26 30 33 33 33 33 36 36 38 38 50 42 59 59 59 57 42 37 36 36 42 48 48 48 48 54 59 59 57 57 54 54 57 54 47 50 50 50 50 50 48 48 48 48 47 48 48 57 48 48 48 59 59 59 44 44 30 30 30 44 44 57 57 57 57 57 59 68 68 68 57 57 54 57 54 57 57 57 57 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 52 57 52 50 50 50 50 50 50 57 57 54 54 54 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 59 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 42 32 30 30 33 35 32 32 44 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 59 59 43 43 43 43 46 46 43 48 48 47 43 43 59 44 57 57 57 57 57 59 59 48 48 48 59 48 48 48 59 48 57 59 59 59 53 50 50 50 50 34 36 21 21 11 11 9 11 11 15 10 10 10 11 12 26 30 39 50 50 50 50 53 50 57 57 59 59 57 57 57 57 57 57 48 48 48 59 59 59 59 59 59 59 43 43 28 24 14 15 15 41 32 43 46 46 48 48 54 59 44 32 30 30 32 37 36 39 39 43 59 48 54 47 59 42 42 33 30 30 44 44 57 57 44 43 43 43 57 44 57 43 43 43 44 44 57 50 42 35 35 32 43 32 32 20 20 18 18 17 23 21 24 19 24 27 43 32 44 43 35 35 43 43 57 43 43 43 57 57 44 44 35 37 36 44 23 23 23 44 36 44 44 42 42 30 30 28 30 30 42 39 47 47 48 43 47 43 43 43 43 39 47 39 43 43 43 43 46 47 59 59 59 43 39 31 26 23 12 11 11 15 25 34 40 40 30 21 21 13 13 13 26 27 39 23 21 11 11 11 25 25 41 41 41 32 34 20 20 20 18 19 23 24 19 24 17 17 17 21 19 14 15 18 25 18 28 23 15 15 17 24 27 27 26 22 32 23 19 16 12 12 15 24 24 20 23 22 23 23 19 19 11 12 15 25 18 21 21 15 15 11 12 12 11 11 10 15 15 23 11 11 11 16 13 20 27 22 12 11 11 12 13 16 18 14 14 12 13 11 16 13 13 9 10 10 17 15 13 11 11 14 10 11 10 15 10 8 7 7 8 12 10 8 8 8 8 10 9 9 9 10 10 15 16 11 11 10 15 13 8 8 8 11 13 13 14 13 13 10 10 8 8 8 8 10 8 10 10 10 10 10 11 12 11 15 18 23 14 11 16 26 22 22 11 12 11 10 12 10 10 10 8 8 8 10 11 11 11 11 12 12 11 11 10 10 10 19 21 22 25 12 12 11 10 10 10 10 10 9 10 11 11 10 9 9 9 10 10 8 9 9 9 11 13 10 10 12 21 16 21 16 10 10 10 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 9 9 9	Open. Hide. 18 18 22 22 32 32 28 32 32 41 37 37 44 37 32 29 16 12 9 9 11 17 19 12 11 11 11 20 19 27 21 25 26 40 32 33 30 37 33 33 37 37 37 37 37 25 21 10 15 13 15 10 10 12 12 11 23 23 30 30 30 30 33 36 48 57 57 57 59 59 59 59 57 57 47 47 40 42 42 47 57 59 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 51 68 68 68 68 57 57 57 57 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 68 68 51 51 51 68 68 68 68 68 68 50 51 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 57 57 57 54 54 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 53 53 50 59 41 36 28 21 24 15 22 11 11 12 24 30 41 41 50 50 50 59 59 59 59 59 57 57 59 59 59 53 57 57 57 57 57 59 57 57 57 68 68 68 68 59 57 48 48 47 48 48 54 59 59 59 59 57 57 57 68 68 68 68 57 57 57 57 57 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 57 57 57 48 48 43 43 43 43 43 48 48 59 59 54 54 59 59 59 43 32 30 23 37 37 48 48 46 46 43 59 39 43 33 32 28 19 19 30 30 39 39 39 43 40 41 37 37 30 30 25 20 22 25 30 30 39 39 25 23 11 11 11 25 25 39 39 40 40 37 37 28 28 28 28 34 37 39 27 25 17 15 10 15 12 21 21 11 11 11 15 18 15 21 26 22 18 17 32 31 30 30 34 32 22 26 26 9 8 8 8 10 12 14 25 22 21 15 13 15 19 17 15 10 10 12 20 22 17 22 14 14 22 26 20 12 12 12 10 10 10 10 16 19 24 25 11 10 9 8 8 8 8 6 6 8 8 8 8 11 11 9 12 12 12 14 25 16 15 11 18 10 10 11 8 8 8 12 10 10 14 10 13 10 11 11 12 10 10 8 8 8 10 11 12 27 13 10 8 8 8 8 15 23 18 19 21 12 11 11 12 12 9 8 10 10 14 15 17 15 19 16 12 10 10 11 9 8 8 8 8 8 8 9 6 8 6 6 8 8 9 9 10 10 12 12 12 12 12 15 12 19 13 12 8 8 6 6 8 8 8 9 11 9 13 10 10 9 9 9 9 9 9 9 9 8 8 8 11 10 12 12 8 8 6 6 6 8 9 11 10 9 8 8 8 10 7 6 6 6 8 8 9 12 9 8 8 6 6 8 8 9 10 10 12 12 9 9 9 9 9 10 10 9 9 10 15 15 17 19 10 9 9 13 15 14 16 18 14 12 9 10 6 6 8 6 6 13 12 10 11 8 8 8 10 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no413_i18.b1 MSMg01no413_i18.b1 CHROMAT_FILE:
MSMg01no413_i18.b1 PHD_FILE: MSMg01no413_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:16 2005
         (249 letters)



>mm_chr19_38002601_38003249
          Length = 649

 Score =  482 bits (249), Expect = e-140
 Identities = 249/249 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccccagtcccatgcggcctcatgcatcgtatcatatacatacatgcactgtccttggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccccagtcccatgcggcctcatgcatcgtatcatatacatacatgcactgtccttggag 260

                                                                       
Query: 61  aagccattttgctgagtgctgttgacatgctgcttaagcactggaattggaaggcaactg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccattttgctgagtgctgttgacatgctgcttaagcactggaattggaaggcaactg 320

                                                                       
Query: 121 ttgagtcggccatgaaagaaggtctgcgctgtctgcctggcacttgaccaatctgcccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagtcggccatgaaagaaggtctgcgctgtctgcctggcacttgaccaatctgcccca 380

                                                                       
Query: 181 cgccctcatctcctgctcttcttcggagagtgctaagctcatccgtcacgagttcccaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgccctcatctcctgctcttcttcggagagtgctaagctcatccgtcacgagttcccaca 440

                    
Query: 241 gacatcaca 249
           |||||||||
Sbjct: 441 gacatcaca 449


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no413_i18.g1 MSMg01no413_i18.g1 CHROMAT_FILE:
MSMg01no413_i18.g1 PHD_FILE: MSMg01no413_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:16 2005
         (429 letters)



>mm_chr19_38193001_38193829
          Length = 829

 Score =  814 bits (421), Expect = 0.0
 Identities = 427/429 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtccttatgcttgcagagtaaacacaattacccactgggctatatctccttaacaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aggtccttatgcttgcagagtaaacacaattacccactgggctatatctccttaacaacc 621

                                                                       
Query: 61  ctgcccactccaaatacaaattctaatgagtatttgaagctggatagtgagcatcttttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgcccactccaaatacaaattctaatgagtatttgaagctggatagtgagcatcttttg 561

                                                                       
Query: 121 cccctaggcatcccagttgtcaaccggaggaagtgaataggatgcctaagcgtgaatcag 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cccctaggcatcccagctgtcaaccggaggaagtgaataggatgcctaagcgtgaatcag 501

                                                                       
Query: 181 ggtagagcctgaaaaactattaccatctgattggcatcctctagcccacccaataggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggtagagcctgaaaaactattaccatctgattggcatcctctagcccacccaataggaaa 441

                                                                       
Query: 241 acagtggggctaagagagacggggggtggggtagattctgtggagcattgataagtcgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagtggggctaagagagacggggggtggggtagattctgtggagcattgataagtcgtg 381

                                                                       
Query: 301 acctcgagttgttggtggcataagttgagggcgatagacattagacagagacacatgtta 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acctcaagttgttggtggcataagttgagggcgatagacattagacagagacacatgtta 321

                                                                       
Query: 361 ttggagggtgtagtagtgaagacagtagtacagctgcaggggtcctttagaaaagcattg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttggagggtgtagtagtgaagacagtagtacagctgcaggggtcctttagaaaagcattg 261

                    
Query: 421 tgctatcag 429
           |||||||||
Sbjct: 260 tgctatcag 252


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space:   344400
Effective search space used:   344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information