Query= MSMg01no414_b11.b1 MSMg01no414_b11.b1 CHROMAT_FILE:
MSMg01no414_b11.b1 PHD_FILE: MSMg01no414_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:59 2005
(607 letters)
>mm_chr19_37306609_37307615
Length = 1007
Score = 1106 bits (572), Expect = 0.0
Identities = 593/604 (98%), Gaps = 7/604 (1%)
Strand = Plus / Plus
Query: 4 ggaattcttcagactgtagagaaaaataaatccatccataaggccacaggaaaaacaaac 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcagactgaagagaaaaataaatccatccataaggccacaggaaaaacaaac 263
Query: 64 catactaggataatagctaagcaagagagaaagaggggggaaaacaaacaatgcaaacta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catactaggataatagctaagcaagagagaaagaggggggaaaacaaacaatgcaaacta 323
Query: 124 aaatagtttttaaaaactgacaggaatgaatacacacctttcaataataactgtgaatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatagtttttaaaaactgacaggaatgaatacacacctttcaataataactgtgaatat 383
Query: 184 taatgatatcaattcccttagtgaaaagacacagagggatagattagatcaaaaacaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatgatatcaattcccttagtgaaaagacacagagggatagattagatcaaaaacaaaa 443
Query: 244 acaaaggccgggcgtggtggtgcacgcctttaatcccagcactctggaggcagaggcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acaaaggccgggcgtggtggtgcacgcctttaatcccagcactctggaggcagaggcagg 503
Query: 304 cagatttctgagttcgaggccagcctggtctataaagtgagttccaggacagccagggct 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cggatttctgagttcgaggccagcctggtctataaagtgagttccaggacagccagggct 563
Query: 364 acacagagaaaccctgtctcaaaaaccanaaaaaaaaaaaaaaaaaaaaacaggcaccat 423
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 564 acacagagaaaccctgtctcaaaaacca-------aaaaaaaaaaaaaaacaggcaccat 616
Query: 424 ctgtttgctgcctctaagaaagtgcaccttatcacaaaagacagacattactgtagggta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgtttgctgcctctaagaaagtgcaccttatcacaaaagacagacattactgtagggta 676
Query: 484 aaagacaaggaaaatgtactctaagcaaatggacctaggaagcaagcagatgttgctgtc 543
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aacgacaaggaaaatgtactctaagcaaatggacctaggaagcaagcagatgttgctgtc 736
Query: 544 aaaataggcttcaatccagaaccattgagaagagataaaggctactttatacagatgacg 603
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 737 aaaataggcttcaatccagaaccattgagaagagataaaagctactttatacagatgacg 796
Query: 604 tgaa 607
||||
Sbjct: 797 tgaa 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_b11.g1 MSMg01no414_b11.g1 CHROMAT_FILE:
MSMg01no414_b11.g1 PHD_FILE: MSMg01no414_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:59 2005
(222 letters)
>mm_chr19_37337514_37338135
Length = 622
Score = 414 bits (214), Expect = e-120
Identities = 220/222 (99%)
Strand = Plus / Minus
Query: 1 tcaattgactgactgactccctccccattctgctgttcagagcttttaagtactcagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcaattgactgactgactccctccccattctgctgttcagagcttttaagtactcagcag 253
Query: 61 gggaacgaattgcaggtacaccttgctgacttaacctctctctttcaatttcataaatat 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gggaaaaaattgcaggtacaccttgctgacttaacctctctctttcaatttcataaatat 193
Query: 121 atttattatttaaattgtgtatatgagtgtgtattgtgtatgtgtgtataaaaaaagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atttattatttaaattgtgtatatgagtgtgtattgtgtatgtgtgtataaaaaaagagt 133
Query: 181 atgtgtatatgagtgagtatatgagtaaatgcttgtgtatga 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgtgtatatgagtgagtatatgagtaaatgcttgtgtatga 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
