Query= MSMg01no416_a04.b1 MSMg01no416_a04.b1 CHROMAT_FILE:
MSMg01no416_a04.b1 PHD_FILE: MSMg01no416_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:32 2005
(576 letters)
>mm_chr19_32393065_32394040
Length = 976
Score = 1009 bits (522), Expect = 0.0
Identities = 561/578 (97%), Gaps = 8/578 (1%)
Strand = Plus / Plus
Query: 1 aagatagacatcctacccaatagtcctcagatttgtttggccatggaatatttacacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatagacatcctacccaatagtcctcagatttgtttggccatggaatatttacacatt 260
Query: 61 ttaccctctgaactgtaaaagcagttagcaatattttttttgaaattaggtgcatacttg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 ttaccctctgaactgtaaaagcagttagcaatattgtttttgaaattaggtgcatacttg 320
Query: 121 tacaggacagatgaaaggtcttaattctgtcatcatgtggcaggcctatcaatgacctat 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 321 tacaggacagatgaaaggtcttaattctgtcatcatgtgccaggcctatcaatggcctat 380
Query: 181 tgaatggaatttacatcataatccctaaaacctatgcatgtttctttacaaagtaaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatggaatttacatcataatccctaaaacctatgcatgtttctttacaaagtaaaaag 440
Query: 241 ggaggttattatc--ctaggggttggggagaggggcttttacaaatgcaattaggctaaa 298
||||| | | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 ggagg------gcagcaaggggttggggaaaggggcttttacaaatgcaattaggctaaa 494
Query: 299 gatattgcattggagaggcctggtttgtcccaatatacagtcaaaagtgtcctcaacatg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gatattgcattggagaggcctggtttgtcccaatatacagtcaaaagtgtcctcaacatg 554
Query: 359 taggaaccagcctgataccaaatacaaggggtgttggggagaaaggcaactgatctccca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 taggaaccagcctgataccaaatacaaggggtgttggggagaaaggcaactgatctccca 614
Query: 419 gatacaaataagtcagcccaagaaaagggattctggagccaccacaagctgcaagagaaa 478
|| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 615 gagacaaataaatcagcccaagaaaaggaattctggagccaccacaagctgcaagagaaa 674
Query: 479 agagcagattctcctagaccctgcagagagggaggggcagccctacccacaccttcactt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agagcagattctcctagaccctgcagagagggaggggcagccctacccacaccttcactt 734
Query: 539 cagaccattaaagccagtactagatagacttcaggccc 576
||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cagaccattaaagccagtactagatagacttcaggccc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_a04.g1 MSMg01no416_a04.g1 CHROMAT_FILE:
MSMg01no416_a04.g1 PHD_FILE: MSMg01no416_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:32 2005
(173 letters)
>mm_chr19_32515252_32515823
Length = 572
Score = 306 bits (158), Expect = 6e-88
Identities = 167/170 (98%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 1 gaattccataaaaatactaagccagggagacaagaagcctgggtctgcacagtgggggat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 369 gaattccataaaaatactaagccagggagacaagaagcctgcgtctgcacagt-gggtat 311
Query: 61 ttaggctaggaaggaacagattttgggtcccacagcactgcagcaatggcagagtgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttaggctaggaaggaacagattttgggtcccacagcactgcagcaatggcagagtgccct 251
Query: 121 gagcagctgtggcagttttctgggacaattcatctcctgatgagagccta 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gagcagctgtggcagttttctgggacaattcatctcctgatgagagccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 572
Length adjustment: 8
Effective length of query: 165
Effective length of database: 564
Effective search space: 93060
Effective search space used: 93060
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
