GGCTCACTATTTGCAGAGGATGCGCGGAATTCCCAGCAGCTCCCAGGCAG
CATTACTCTTGCCCAGCTCACTCTTCTATATTCAGAACTAGAAATGGATG
TTTGAGTCTGGCTGCAGAGATGGTAGGCAGGAGCAAAGCTGAGTGAAGAA
CGGTATCTGTGGAAAGGATGAAGCAGAGAGATTCAAAATCAGCACCCATG
AAACACTGGAGTTCAAAAACTAACTCAGACAAGCAAAGTCTGGCATGGGG
AGTCCTTGGAGCAGGCCTGCCTGGGCTGACCCCACCTCTGACACTTACTG
TGTTTCTCTGGCTAAACCTCTCTTGCTTTCCTTTTTTTTTTAATAAACCA
AGAGAGACAATGACAGAGCCAGCATGAGCTCTTTGACTCATGACTCTAGG
AGTAAGTTGCAGGCTGCACTCTCTCACATGTCTTCCCTCTTACCACAGCC
AGTCAAATTGAATGGCCATTCAGTCAAAAGCTAATCATTGAAATGGACTT
CAAAAATAAGACTTGTCTCATACATACCTTATTTTATAGAAGTATGTATT
GATCAAAGCCAGGTCCTTGTACATGTTGTTTGTGCTCTATCACAAAGCTA
CATCCCCAGTGCCTTTTGGTTTTAAAGATCATAATTATAATAATAATAGG
CTAGATGTGTTAGATATGTATGAATGAAAAGCACAACATTTCTTCTATTA
GCCCAGCCCTGCAA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGGTCCTTGTATTCGTCCACAAGTC
GTTTGTCCACAGGAACATCTTCCTAGCCCCTGTTGTTGGTTTTCTTAATG
ATAGCCATTCTGACTGGAGCAAAGTAGAATCTCAGTGTTGTAGTAAGTTT
GCATTTTTTTTCTGGTAATTAAAGATGTTGAATACATTTTCAAATGTTTA
TTGGAAAATGTATTTCTTCCTTTGATAACTGTTTATTCATTTCATTAATT
CAGGACTATGGAAGGACTTCTGATGAATACAAATTAGCAGAATTAATATT
GTAAAAAAGGCCGTACTATCAAAAGCAATCTACAGATTCAGTGTGATCCC
CATAAAAACTCTCCATGACTTTCTTCACAGAACTTGACATGACAACCCCA
AATTTCATGTGGGATCACCAAAGACAGTGACTAGTCAAAGCAATCAATCC
TAAGTAGAGAGGTATCAGAGCACCTGATCTTAAATTACACTACGAAGTTA
TACTAACAAAACCAGCATGGGACTTAACGGCACAGAAACGGACACATAGA
TCAATAGAAGAGAGTTGAGGATTCAGGATAAACTCACCCAGCTATAGCCA
TCCAATGCCCGGCAGAGCTGTTAAAAACATTGGGGGAAAAGAAACCTCTT
TCATGAATGATGCCACCCAAGCTGTTATCCCCCGAAAAGTCTG

Query= MSMg01no416_d17.b1 MSMg01no416_d17.b1 CHROMAT_FILE:
MSMg01no416_d17.b1 PHD_FILE: MSMg01no416_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:48 2005
         (588 letters)



>mm_chr19_38762031_38763018
          Length = 988

 Score = 1050 bits (543), Expect = 0.0
 Identities = 552/555 (99%), Gaps = 1/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttcagaactagaaatggatgtttgagtctggctgcagagatggtaggcaggagcaaagct 93
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ttcagaactagaaatggatgtttgagtctggctgcagagatggtaggcaggagcaaagct 929

                                                                       
Query: 94  gagtgaagaacggtatctgtggaaaggatgaagcagagagattcaaaatcagcacccatg 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gagtgaagaacggtatctgtggaaaggatgaagcagagagattcaaaatcagcacccatg 869

                                                                       
Query: 154 aaacactggagttcaaaaactaactcagacaagcaaagtctggcatggggagtccttgga 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aaacactggagttcaaaaactaactcagacaagcaaagtctggcatggggagtccttgga 809

                                                                       
Query: 214 gcaggcctgcctgggctgaccccacctctgacacttactgtgtttctctggctaaacctc 273
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 808 gcaggcctgcctgggctgaccccacctctgacacttactgtggctctctggctaaacctc 749

                                                                       
Query: 274 tcttgctttccttttttttttaataaaccaagagagacaatgacagagccagcatgagct 333
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tcttgctttcc-tttttttttaataaaccaagagagacaatgacagagccagcatgagct 690

                                                                       
Query: 334 ctttgactcatgactctaggagtaagttgcaggctgcactctctcacatgtcttccctct 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ctttgactcatgactctaggagtaagttgcaggctgcactctctcacatgtcttccctct 630

                                                                       
Query: 394 taccacagccagtcaaattgaatggccattcagtcaaaagctaatcattgaaatggactt 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 taccacagccagtcaaattgaatggccattcagtcaaaagctaatcattgaaatggactt 570

                                                                       
Query: 454 caaaaataagacttgtctcatacataccttattttatagaagtatgtattgatcaaagcc 513
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 caaaaataagacttgtctcatacataccttattttatagaagtatgtattgatcaaagcc 510

                                                                       
Query: 514 aggtccttgtacatgttgtttgtgctctatcacaaagctacatccccagtgccttttggt 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aggtccttgtacatgttgtttgtgctctatcacaaagctacatccccagtgccttttggt 450

                          
Query: 574 tttaaagatcataat 588
           |||||||||||||||
Sbjct: 449 tttaaagatcataat 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space:   565284
Effective search space used:   565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)