Query= MSMg01no418_h16.b1 MSMg01no418_h16.b1 CHROMAT_FILE:
MSMg01no418_h16.b1 PHD_FILE: MSMg01no418_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:41 2005
(588 letters)
>mm_chr19_19976441_19977428
Length = 988
Score = 1023 bits (529), Expect = 0.0
Identities = 571/585 (97%), Gaps = 1/585 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgttctggctttctgtgatgatgaaccacaatgtagaagtataagccaaataa 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcttgttctggctttctgtgatgatgaaccacaatgtagacgtataagccaaataa 264
Query: 65 accctcttcctactaactttcttttttagggtgtttaactgcagcaataaaaactctaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accctcttcctactaactttcttttttagggtgtttaactgcagcaataaaaactctaag 324
Query: 125 caatacaaggtgagttggggagcaccttcatagaagcagggggagagggatgggacaggg 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 caatacaagatgagttggggagcaccttcatagaagcagggggagagggatgggataggg 384
Query: 185 ggtttccagaacggaaaccgggaaatgggatagcatttgaaatgtaaataaataaaatat 244
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtttccagaagggaaaccgcgaaatgggatagcatttgaaatgtaaataaataaaatat 444
Query: 245 ccaataaaaatttttaaatcattattatttatcaagttttcactttaaattttatatata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaataaaaatttttaaatcattattatttatcaagttttcactttaaattttatatata 504
Query: 305 caaacaaatgtaacatttgaagtagagaaatgaatgcatgatttcacaaagaagaaagct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaacaaatgtaacatttgaagtagagaaatgaatgcatgatttcacaaagaagaaagct 564
Query: 365 aagattcagaatctgtgagagccagacctgatatgtatggtggctaaaattggctatcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagattcagaatctgtgagagccagacctgatatgtatggtggctaaaattggctatcaa 624
Query: 425 cttgattgtatgatgtaggatcaactacagaaacatgaagcttctgagagcttctgcaat 484
|||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 625 cttgattgcatgatgtaggatcaactacagatacaggaagcttctgagagcttctgcaat 684
Query: 485 agattttataaatcaagttattttgaagtagaagacttaccctaa-catagtcaccatag 543
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 ggattttataaatcaaattattttgaagtagaagacttaccctaaacatagtcaccatat 744
Query: 544 tctagtggcagcccccattgaagaacagggaggaggaaaacttag 588
||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 745 tctagtggcagtccccattgaaggacagggaggaggaaaacttag 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_h16.g1 MSMg01no418_h16.g1 CHROMAT_FILE:
MSMg01no418_h16.g1 PHD_FILE: MSMg01no418_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:41 2005
(478 letters)
>mm_chr19_20068602_20069479
Length = 878
Score = 909 bits (470), Expect = 0.0
Identities = 476/478 (99%)
Strand = Plus / Minus
Query: 1 tcagagaagatggtaattaatgtaactactaataccatatgtgatgatttgccttcatga 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 678 tcagagaagatggtaattaatgtaactactaataccatatgtggtgatttgccttcatga 619
Query: 61 ccaaaacaactaaaaatataaagcaatggctgtctcaaaagcttaaattgctttctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccaaaacaactaaaaatataaagcaatggctgtctcaaaagcttaaattgctttctctgt 559
Query: 121 tggatcatattagggtctcagaagtaccttagctttagattgaattgttctaatgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggatcatattagggtctcagaagtaccttagctttagattgaattgttctaatgaaaat 499
Query: 181 ttctacctaacacagaatttctaagtaactactgtttagtcccttggacggtttttttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttctacctaacacagaatttctaagtaactactgtttagtcccttggacggtttttttat 439
Query: 241 ggcatgttagtgatggcattctatcatcaagttaatatttattgattgatattaaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggcatgttagtgatggcattctatcatcaagttaatatttattgattgatattaaattct 379
Query: 301 gatttgccaatgcatattggctatatgcattatacatgacctattaagcatgggcttatg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 378 gatttgccaatgcatattggctatatgcattatagatgacctattaagcatgggcttatg 319
Query: 361 tataaatatacacacatatgtgcaaccatgcctcaaacatatacaactctcttaaaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tataaatatacacacatatgtgcaaccatgcctcaaacatatacaactctcttaaaatag 259
Query: 421 caaaaggatattagaaagtttgctaagcacaatgggaaaaaaagcaagaaaatagact 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caaaaggatattagaaagtttgctaagcacaatgggaaaaaaagcaagaaaatagact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
