GGGGTTTGTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACCTAGAATGTTTTCCCTTGGGTTTTCTGTGGTGTTTG
CTCTATTGTAGCATTTATTTTTTGGTACCATATTTGAAGTTTCTTAAGAC
TATAATTATACATCTTATTCTTTTTGAATCCTCTTTAGAATTCATGCAAA
TAACTTGTATGAAATAAAAGCATAATAAATCATTTCTAATTTCTACTTTT
GATCCCCAAAGAACAAATTATTAAAAATAATACCATAAGATAGATTATGA
AGAAAGATTTATTATTACCATAGGAACAATGTATTAAGTACTTTATTCCT
AATGACAGATTCATTTTCAGCTATAACTAATGGTATATCATCAAATAAGG
TATATAGCAACTAAAATATTCTATGATAACCTAAATCAAATTATATTGTA
CCTTGATAAAGTGTGCCTGTGTGGGTATGATAAAATGTAAAGATGTAAAT
TAGATTATTTAGTTAATAGAAATGTAAAGACTTATTTTCAACTCAAATTG
ACAACAAATTCTCTTTGCCCACAAACATTTAAGGGACTTCGGTGAATGAT
ATTTGTAACTGATCTTTTAAATATCTCCCATGATCTGCACCTGGAACTGA
CCCTGTGCCACAGCTTTTCCTACTCAGATCCCCAGGGAGAGAGCAGGGCT
CTCACGAATGGTAGCCCCCCGGAAAGACCAGGTAGAACACTACT

NAAAAATTCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATATATTCTCCATGCA
GATTCTTATTAGAAACATGACCCATCAATCTTTTCTCTCATTTTATCTTT
TTATTTTCTTTTATAAATTATTATTATCTTATTTGATATTGTGTGTGATT
TGCCTGCATGCACCTGTGCACCGAGTGCATGCCTCGCACATGTAGAGGCC
AGCAGAGCGTCAGAACTGGAGTTGTACATAATGACGAATTGCCATGTAGG
TGAATGGAATTAAACTTGGAATTAAAAGATCAGTCAGTGCTCTGGCCAGC
CAGTGTTGTTATTTGCTGAGCTATCTCTCAGGCCCCTTTGTACTCTTTTG
ATAATTCTAAAATAAATAAACATTTGATTTCTGAAATAGTTAAAATTATA
TTTTTCTTTTANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAATAAGTGATATCTAAAAAACAACTGTCAAATATAAGGTCATGA
GAACTTACCCCTGTGCAATTTTCTAGGAATTTGAAGTTGTAGTTTGTGCT
TTCTATCTTGTAGAGATTTCTATACTCANTATGAAGCAAAAAACCGCCTC
CCCTTTTTGTTTATTGAGGGGGCATTGGTTCACTGCCCCTGCTGGGAAAA
AAAAATTTTTTTCCTTTTTAAAAACCGGGAACATTTTCGAAAATTCCTTT
A

Query= MSMg01no421_b23.b1 MSMg01no421_b23.b1 CHROMAT_FILE:
MSMg01no421_b23.b1 PHD_FILE: MSMg01no421_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:10 2005
         (521 letters)



>mm_chr19_33424771_33425691
          Length = 921

 Score =  992 bits (513), Expect = 0.0
 Identities = 516/517 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacctagaatgttttcccttgggttttctgtggtgtttgctctattgtagcattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaattcacctagaatgttttcccttgggttttctgtggtgtttgctctattgtagcattt 662

                                                                       
Query: 65  attttttggtaccatatttgaagtttcttaagactataattatacatcttattctttttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attttttggtaccatatttgaagtttcttaagactataattatacatcttattctttttg 602

                                                                       
Query: 125 aatcctctttagaattcatgcaaataacttgtatgaaataaaagcataataaatcatttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatcctctttagaattcatgcaaataacttgtatgaaataaaagcataataaatcatttc 542

                                                                       
Query: 185 taatttctacttttgatccccaaagaacaaattattaaaaataataccataagatagatt 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 taatttctacttttgatccccaaagaacaaattattaaaaataataccataaaatagatt 482

                                                                       
Query: 245 atgaagaaagatttattattaccataggaacaatgtattaagtactttattcctaatgac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgaagaaagatttattattaccataggaacaatgtattaagtactttattcctaatgac 422

                                                                       
Query: 305 agattcattttcagctataactaatggtatatcatcaaataaggtatatagcaactaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agattcattttcagctataactaatggtatatcatcaaataaggtatatagcaactaaaa 362

                                                                       
Query: 365 tattctatgataacctaaatcaaattatattgtaccttgataaagtgtgcctgtgtgggt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattctatgataacctaaatcaaattatattgtaccttgataaagtgtgcctgtgtgggt 302

                                                                       
Query: 425 atgataaaatgtaaagatgtaaattagattatttagttaatagaaatgtaaagacttatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgataaaatgtaaagatgtaaattagattatttagttaatagaaatgtaaagacttatt 242

                                                
Query: 485 ttcaactcaaattgacaacaaattctctttgcccaca 521
           |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcaactcaaattgacaacaaattctctttgcccaca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)