Query= MSMg01no421_e02.b1 MSMg01no421_e02.b1 CHROMAT_FILE:
MSMg01no421_e02.b1 PHD_FILE: MSMg01no421_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:22 2005
(485 letters)
>mm_chr19_17931222_17932106
Length = 885
Score = 609 bits (315), Expect = e-178
Identities = 342/351 (97%)
Strand = Plus / Plus
Query: 1 gcagaaacagttgtttccacaagagggagttctctttctgaaatcatagaaaagctatgc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gcagaaacagttgtttccacaagagggagttttctttctgaaatcatagaaaagctatgc 260
Query: 61 atagttttaatcacagattaaagcaaacaataacgtttgaacatccggaactaaatggtc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 atagttttaatcacagattaaagcaaacaataacatttgaacatccggaactaaatggtc 320
Query: 121 tttcataaacaattaagaaggattaaaagatcattattttttacttatattaaattatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcataaacaattaagaaggattaaaagatcattattttttacttatattaaattatga 380
Query: 181 ctaatttcttggcagaacaaagctaaaaaggatactactgtgaagaactgagctagcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaatttcttggcagaacaaagctaaaaaggatactactgtgaagaactgagctagcctt 440
Query: 241 tcacaaaaactttgtttctctgaacacagcaaactgaagcccccagtttccctccccagc 300
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacaaaaacagggatcctctgaacacagcaaactgaagcccccagtttccctccccagc 500
Query: 301 ttcatcaagaacttagtgcctcttcagtggtttcttcctttccaaggcttt 351
|||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ttcatcaaaaacttagtgcctcttcagttgtttcttcctttccaaggcttt 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_e02.g1 MSMg01no421_e02.g1 CHROMAT_FILE:
MSMg01no421_e02.g1 PHD_FILE: MSMg01no421_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:22 2005
(252 letters)
>mm_chr19_18107583_18108236
Length = 654
Score = 458 bits (237), Expect = e-133
Identities = 247/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 tgaggtactacatttgatcttttgaaattgacatttcctgatcctattgtcacattcttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 451 tgaggtactacatttgatcttttgaaattgacatttcctgctcctattgtcacattcttt 392
Query: 61 ggcttattat--aaaaaaaaaacccacagtttttgtttatgttttatttaaagagcacag 118
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggcttattataaaaaaaaaaaacccacagtttttgtttatgttttatttaaagagcacag 332
Query: 119 agaaattgaaatatttttcttagcattcattattttattcaaccgattttccccacgagt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 331 agaaattgaaatatttttcttagcattcattattttattcaaccgattttccccaggagt 272
Query: 179 ttttccccccctcttgtgatttgcttcctttttaactttgaacactcctaaactgaaacc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttttccccccctcttgtgatttgcttcctttttaactttgaacactcctaaactgaaacc 212
Query: 239 taggtatttcc 249
|||||||||||
Sbjct: 211 taggtatttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 654
Length adjustment: 9
Effective length of query: 243
Effective length of database: 645
Effective search space: 156735
Effective search space used: 156735
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
