CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAAAGAGAATTTACATGAAAGCAGGTTTGATTCTGTAATTGACCA
TTTATTATGTACCCTGAACATCTGCTTGTCATAGTGGGAATACGCTGTGG
GTTATAGCAAATGAAGATACGATCAATCCTTATTTGGTCAGGCTTTTAGG
AAGAAAGGGCTTGCTCAGTTCCAGCACAGTGCTCCCTTGCCACTGAGAAC
CACAGTGCTCCCTTACCACTGAGAACCACAGTGCTGCCTTACCACTGAGA
ACCACAGTGCTCCCTTACCACTGAGAACCATAGTGCTCCCTTACCACTGA
GAGCCACAGTGCTCCCTTACCACTGAGAACCACAGTGCTCCCTTACCACC
AATAATCACAGTGCTTCCTTACCACTGAGAATCACAGTGCTCCCTTGCCA
CCAAGATCCACAGTGCTCCCTTACCACCAATAATCACAGTGCTGCCTTAC
CACTGAGAATCACAGTGCTCCCTTACCACTGAAAACCATAGTGCTCCCTT
ACCACCAATAATCACAGTGCTCCCTTACCACTGAGAATCACAGTGCTCCC
TTGTCANCAAGATCCACAGTGCTGCCTTACCACTGAGAAACACGTGCTCC
GTTACCACCATATTCCAGTGTTCCCTTACCACTGTAAAATCCAGTGCTTC
CTTTCCCCAAGAGCTATGTGTTGCCTTACCGTGAAAAATACGTGGTCCCT
TATCCAAATATCATATGGCCCG

ATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTAAGGGCAAGAAAGGAAGGGCTACCAC
TCTGAGAATTAGCCGCATCCAGTGAGAACGACTAAGGCTATGAGCATCCA
GCTTAGTAGCCTGACTGGGAAGCCTGTGAACTGATGCTGCAAACCTCTGT
TCTCCAGAGCTGAGTGAGCGCAATGGGTTCACGGCCTTCCTTATCGCCCT
TTCCTTATAGCATGACCTTCGCTTACAATCGAGGCACAAGCCTGGTGATG
ATTACAAAGGCACCCCCAACTCATTAGCATCTGACACACTGGCTTTGCCA
GGCTGGCAACGGTGGCAGGCCATGTATTAAATATCAGTTCACAGAATCAG
TTAACAAAACTCGATATTATTGACTTGAATAAGGACTAGCTTGAACAAAA
ACAAAGATTATTTAACCACAGCCACTGTCAGGCAGACATGTTACTCTTAA
GAACAATAACAAAAAAAAAAACCAGTGTTTTACTGTTTCTGATCTCATCT
TGGCAATGTTCCCATCTCCAGAGGGACATAGTGTCCAGATTTCTCAAGAT
GTAGGCATCAGTATATCTGTCAGTGTTAAGGGTTTTGCATTTTAGAAACA
CAGCTGGAAGAGAAGAAGAGGATTAGAAGGAGCCCCTGGGGTCGAATGAA
TAAACCCTCCCCATAGCAACTCCACCTTTANGGTTGTCACCGAAACTGAG
GGAAAGGGGGAAAAACAAAGGCCCCCGG

Query= MSMg01no421_f03.g1 MSMg01no421_f03.g1 CHROMAT_FILE:
MSMg01no421_f03.g1 PHD_FILE: MSMg01no421_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:27 2005
         (513 letters)



>mm_chr19_58060512_58061421
          Length = 910

 Score =  953 bits (493), Expect = 0.0
 Identities = 507/513 (98%), Gaps = 3/513 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctaagggcaagaaaggaagggctaccactctgagaattagccgcatccagtgagaacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 710 tctaagggcaagaaaggaagggctaccactctgagaattagccgcatccagtgagaatga 651

                                                                       
Query: 61  ctaaggctatgagcatccagcttagtagcctgactgggaagcctgtgaactgatgctgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctaaggctatgagcatccagcttagtagcctgactgggaagcctgtgaactgatgctgca 591

                                                                       
Query: 121 aacctctgttctccagagctgagtgagcgcaatgggttcacggccttccttatcgccctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aacctctgttctccagagctgagtgagcgcaatgggttcacggccttccttatcgccctt 531

                                                                       
Query: 181 tccttatagcatgaccttcgcttacaatcgaggcacaagcctggtgatgattacaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tccttatagcatgaccttcgcttacaatcgaggcacaagcctggtgatgattacaaaggc 471

                                                                       
Query: 241 acccccaactcattagcatctgacacactggctttgccaggctggcaacggtggcaggcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acccccaactcattagcatctgacacactggctttgccaggctggcaacggtggcaggcc 411

                                                                       
Query: 301 atgtattaaatatcagttcacagaatcagttaacaaaactcgatattattgacttgaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgtattaaatatcagttcacagaatcagttaacaaaactcgatattattgacttgaata 351

                                                                       
Query: 361 aggactagcttgaacaaaaacaaagattatttaaccacagccactgtcaggcagacatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aggactagcttgaacaaaaacaaagattatttaaccacagccactgtcaggcagacatgt 291

                                                                       
Query: 421 tactcttaagaacaataacaaaaaaaaaaaccagtgttttactgtttctgatctcatctt 480
           ||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||||
Sbjct: 290 tactcttaagaacaacaacaacaaaaaa---cagtgttttactgtttctgatctcatctt 234

                                            
Query: 481 ggcaatgttcccatctccagagggacatagtgt 513
           |||||||||||||||||||||||||||||||||
Sbjct: 233 ggcaatgttcccatctccagagggacatagtgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 910
Length adjustment: 10
Effective length of query: 503
Effective length of database: 900
Effective search space:   452700
Effective search space used:   452700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)