Query= MSMg01no428_j08.b1 MSMg01no428_j08.b1 CHROMAT_FILE:
MSMg01no428_j08.b1 PHD_FILE: MSMg01no428_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:48 2005
(492 letters)
>mm_chr19_24845378_24846269
Length = 892
Score = 797 bits (412), Expect = 0.0
Identities = 418/420 (99%)
Strand = Plus / Minus
Query: 1 gtatctgcagcccctgactttattagttccaattttaggacagaatttagctagaaactt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtatctgcagcccctgtctttattagttccaattttaggacagaatttagctagaaactt 361
Query: 61 tggggttcctaacttctaacaacacagctaaggccttttatataaaaagaacactttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggggttcctaacttctaacaacacagctaaggccttttatataaaaagaacactttgta 301
Query: 121 gtctcatggtcctttgcctaacttctgtcttctgtttaaaacgaaatggtcccttgtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtctcatggtcctttgcctaacttctgtcttctgtttaaaacgaaatggtcccttgtcaa 241
Query: 181 atgtgtaactggctcggtctgtactgacatgcctacattggtgtgagtctgtgtttttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atgtgtaactggctcggtctgtactgacatgcctacattggtgtgagtctgtgtttttat 181
Query: 241 gtaagtttgtttgggttggtgtgtcttcatgtctcttatgggtgtgtgtctgtggacgtc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtaagtctgtttgggttggtgtgtcttcatgtctcttatgggtgtgtgtctgtggacgtc 121
Query: 301 acatgagtgtatctgcggatgcatttctgtgtgtgtgtttcacagagaaaaagagcacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 acatgagtgtatctgcggatgcatttctgtgtgtgtgtttcacagagaaaaagagcacgg 61
Query: 361 gtaggcagaaagctctccaaagaaggccaaagcctggaaatacctgcgcctcctttactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtaggcagaaagctctccaaagaaggccaaagcctggaaatacctgcgcctcctttactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_j08.g1 MSMg01no428_j08.g1 CHROMAT_FILE:
MSMg01no428_j08.g1 PHD_FILE: MSMg01no428_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:48 2005
(473 letters)
>mm_chr19_24647616_24648488
Length = 873
Score = 754 bits (390), Expect = 0.0
Identities = 441/470 (93%), Gaps = 21/470 (4%)
Strand = Plus / Plus
Query: 1 agtagatttgatttcttatttacatccaagactcaaaggctagccctcagcctaatgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagatttgatttcttatttacatccaagactcaaaggctagccctcagcctaatgcct 260
Query: 61 cacaaataccatccagaaagaataaatggctcaagaaaatagggattgccacatagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaataccatccagaaagaataaatggctcaagaaaatagggattgccacatagtcct 320
Query: 121 ggctcatctaggagaaaggcaggtgggggaagaagctgagcctgcaggctggggaaagtg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctcatctaggagaaaggcagatgggggaagaagctgagcctgcaggctggggaaagtg 380
Query: 181 gagagcaagtacctgtgcgattgagtaaaaccacccaacctagcagaggatggctgtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagagcaagtacctgtgcgattgagtaaaaccacccaacctagcagaggatggctgtctg 440
Query: 241 atttatgggcccagattaagccctcgtggagtgatttggagagtggataagagacaagac 300
| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaacgggcccagattaagccctcatggagtgatttggagagtggataagagacaagac 500
Query: 301 taaggagcgaagcttgttttgatgctctagaagcaacagattatcaacactagttaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 taaggagcgaagcttgttttgatgctctagaagcaacagattatcaatactagttaaaca 560
Query: 361 tatcaggtgctttaatacatcattcttagtctccatgccaacctcccagagagaggtacc 420
|||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 561 tatcaggtgctttaatacgtcattcttagtctccatgccaacct------------t--- 605
Query: 421 aacctcccagagaagcatccttgatccttcattagacatgcaaacagcag 470
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ---ct---agagaagcatccttgatccttcattagacatgcaaacagcag 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
