Query= MSMg01no432_l10.b1 MSMg01no432_l10.b1 CHROMAT_FILE:
MSMg01no432_l10.b1 PHD_FILE: MSMg01no432_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:32 2005
(464 letters)
>mm_chr19_51503682_51504545
Length = 864
Score = 700 bits (362), Expect = 0.0
Identities = 423/444 (95%), Gaps = 6/444 (1%)
Strand = Plus / Minus
Query: 24 accatatttaaagtgtactgttttcaaggagaattgtctttatttcttgtctgtaaatgt 83
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 854 accatatttaaagtatactggtttcaaggagaattgtctttatttcttgtctgtaaatgt 795
Query: 84 cagatgagctacagagcatatacaagcaagtaacacaagaagtatgattatccctcaatc 143
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 794 cagatgagctacagagcatatacaagcaagtaacacaagaagtataattatccctcaatc 735
Query: 144 aaaaaagttaaaaactttccctacaatag-atttcagaagaa--tttttgttttgttttg 200
||||||||||||||||| | || |||||| ||||||||||| ||||| |||| ||||
Sbjct: 734 aaaaaagttaaaaacttgctctgcaatagtttttcagaagaatgtttttctttt-tttt- 677
Query: 201 ttttgttttttttattcttgtcctgcatgtgtttttgtctcgagttaggttcagtatcag 260
|||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 676 tttt-ttttttttattcttgtcctgtgtgtgtttttgtctccagttaggttcagtatcag 618
Query: 261 aacagcagctctggttttctgcttcctagtttaggccaaaggttagatcattcactggtt 320
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 617 aacagcagctctggttttctgcttccaagtttaggacaaaggttagatcattcactggtt 558
Query: 321 gctatggattctcatttgtttggagtaagaagaaaaacctcccaaccagtaagagataaa 380
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 557 gctatggattctcatttgtttggagtaagaagaaaatcctcccaaccagtaagagatata 498
Query: 381 cctaagacctgaacatctaatatcaaattctttgtgaaattcttcctaagacttggtagg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cctaagacctgaacatctaatatcaaattctttgtgaaattcttcctaagacttggtagg 438
Query: 441 taggtcttgtcccagtcagtgctc 464
||||||||||||||||||||||||
Sbjct: 437 taggtcttgtcccagtcagtgctc 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_l10.g1 MSMg01no432_l10.g1 CHROMAT_FILE:
MSMg01no432_l10.g1 PHD_FILE: MSMg01no432_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:33 2005
(395 letters)
>mm_chr19_51340999_51341793
Length = 795
Score = 609 bits (315), Expect = e-179
Identities = 361/395 (91%), Gaps = 30/395 (7%)
Strand = Plus / Plus
Query: 1 ttctttttttcctttggtgtctctgtaaaataatactgtacacacacacacacaaacaca 60
|||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttctttttttcctttggtgtctctgtaaaataatactgt--------------------- 269
Query: 61 cacacacaaacacacacacacacacacacacacacacacatacacacacacacacacatg 120
||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 270 -acacacagacacacacacacacacacacacac--------acacacacacacacacatg 320
Query: 121 tatatgtataaatacacttccccttcttgaaaatgagcatatgagaatataatcactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatgtataaatacacttccccttcttgaaaatgagcatatgagaatataatcactaat 380
Query: 181 atgattaatactatgtgttcatgtgactataatgcgattttgtggttcttaagttttaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atgattaatactatgtgttcatgtgactataatgcgattttgtggttcttaagtttgaat 440
Query: 241 tgtagttggtgttttggggtaactgtgagtacatatatgagtctgttttgccttgagacc 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tgtagttggtgttttggggtaactgtgagtacatatgtgagtctgttttgccttgagacc 500
Query: 301 atatatgtgtagatgtatattgaactgatatgcaaatgtgagcgtgagcgtgagcatgtt 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 atatatgtgtagatgtatattgaactgatatgcaaatgtgagtgtgagcgtgagcatgtt 560
Query: 361 ttattggtgtgatatcacgtccacaagtgttaggt 395
|||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattggtgtgatatcacgtccacaagtgttaggt 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
