Query= MSMg01no434_i22.b1 MSMg01no434_i22.b1 CHROMAT_FILE:
MSMg01no434_i22.b1 PHD_FILE: MSMg01no434_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:00 2005
(351 letters)
>mm_chr19_36035875_36036625
Length = 751
Score = 542 bits (280), Expect = e-158
Identities = 331/348 (95%), Gaps = 3/348 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaaccttcttcc-caaacctacaatcgctcttgccaagcccagagagcactga 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcaaccttcagcaacaaacctacaatcgctcttgccaagcccagagagcactga 263
Query: 64 ggaagagagaagagatggggtataacagcaggaagatggggaaatgggctacaaaacact 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 ggaagagagaagagatggggtataacagcaggaagatgggaaaatgggctacaaaacact 323
Query: 124 gtccgctggacatggcatggatattacattcatgaacttgtaggagtggtcgtcaagagt 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 gtccgctggacatggcatggatattacattcatgaacttgtagaagtggtcgtcaagagt 383
Query: 184 cgaggaggggctcgtgaggttaagtggctattggggagagggaagtcatattcctcagtt 243
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 tgaggaggggctcatgaggttaagtggctactggggagagggaagtcatattcctcagtt 443
Query: 244 gtatagctttcttaagtaaacaaaccctcacccatgctctttaaagcaacactaaatgca 303
|||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 gtatagctttctcaggtaaacaaaccctcacccatgctcaagaaagcaacactaaatgca 503
Query: 304 gtggatcacacctcacacacacacacat-acatgagagagagagagag 350
|||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 504 gtggatcacacctcacacacacacacatgaaa-gagagagagagagag 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_i22.g1 MSMg01no434_i22.g1 CHROMAT_FILE:
MSMg01no434_i22.g1 PHD_FILE: MSMg01no434_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:00 2005
(499 letters)
>mm_chr19_36194152_36195049
Length = 898
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 1 caaacagatagagacaagtggcacccagacccatctccttcccctcgggctgattatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 caaacagatagagacaagtggcacccagacccatctccttcccctcgggctgattatccc 639
Query: 61 cagaaataggatgtcccaaagcaacacttcccagccaactggagtgctgataagtccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cagaaataggatgtcccaaagcaacacttcccagccaactggagtgctgataagtccagt 579
Query: 121 tatcagaaagatatggctgtaagtgtgatgcacagtgcttgcattttctttgatacgtta 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 578 tatcagaaagatatggctgtaagtgtgatgcacagtgcttgcattttc-ttgatacgtta 520
Query: 181 gtcatatgagagctgacaaagaaggaaaaagagcagcgatgtggtgcaacattaacaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 519 gtcatatgagagctgacaaagaaggaaaaagagcagcgatgtggtgcaatattaacaggc 460
Query: 241 agctgtcccctgtcttcccgatacgtgggatgactcgcattgctgagcggtgtggtcact 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agctgtcccctggcttcccgatacgtgggatgactcgcattgctgagcggtgtggtcact 400
Query: 301 gccaaaggaatgaccctctcacatttcttcctgattcgcatacgccgcggccagcttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gccaaaggaatgaccctctcacatttcttcctgattcgcatacgccgcggccagcttgtc 340
Query: 361 atctccctcttgggcttcccagacactaagtctggaatgaaaattcacctgcctctgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atctccctcttgggcttcccagacactaagtctggaatgaaaattcacctgcctctgaat 280
Query: 421 tggccactggtgggggcaggggtgtgacttggcttcccaggctggaagattatctcaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tggccactggtgggggcaggggtgtgacttggcttcccaggctggaagattatctcaccc 220
Query: 481 agccctaactatataacgg 499
||||||| |||||||||||
Sbjct: 219 agccctagctatataacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 898
Length adjustment: 10
Effective length of query: 489
Effective length of database: 888
Effective search space: 434232
Effective search space used: 434232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
