Query= MSMg01no439_h06.b1 MSMg01no439_h06.b1 CHROMAT_FILE:
MSMg01no439_h06.b1 PHD_FILE: MSMg01no439_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:35 2005
(387 letters)
>mm_chr19_16951187_16951977
Length = 791
Score = 571 bits (295), Expect = e-167
Identities = 358/401 (89%), Gaps = 37/401 (9%)
Strand = Plus / Minus
Query: 24 atccagtctggaccctttgccttgatcctaaccctgcacattgctctagcccctgcttgc 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atccagtctggaccctttgccttgatcctaaccctgcacattgctctagcccctgcttgc 732
Query: 84 tggatgctctcttcttcacactgggcatggagggactgggcagcctggagtgaacccagc 143
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 731 tggatgctctcttcttcacactaggcatggagggactgggcagcctggagtgaacccagc 672
Query: 144 ctacgtccaggctaagagcgttggtaagaccccgagactagagttgtg--------aa-- 193
||| ||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 671 ctaggtccaggctaagagcgttgataagaccccgagactagagttgtggaggagagaaaa 612
Query: 194 -------------cg----------gctttttctgcacatctttttctgcagttttgtga 230
|| |||||||||||||||||||||||||||||||||||
Sbjct: 611 atcaataattagccgttcaggaacagctttttctgcacatctttttctgcagttttgtga 552
Query: 231 aaactaccttcca----gcaaaaaagcctggcttggaactccgggtgacagcaaagaatc 286
||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 551 aaactaccttccatacagcaaaaaagcctggtttggaactccgggtgacagcaaagagtc 492
Query: 287 accaataattgcccaaagggtaaactacatctgagataaacagtgcctgccagcatcctt 346
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 491 accaataattgcccaaagggtaaactacatctgagataaacagtgcctgctagcatcctt 432
Query: 347 gtggtcagcgactactgcattgtgtagctgtttgtgggtgg 387
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtggtcagcgactactgcattgtgtagctgtttgtgggtgg 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 791
Length adjustment: 9
Effective length of query: 378
Effective length of database: 782
Effective search space: 295596
Effective search space used: 295596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_h06.g1 MSMg01no439_h06.g1 CHROMAT_FILE:
MSMg01no439_h06.g1 PHD_FILE: MSMg01no439_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:35 2005
(371 letters)
>mm_chr19_16777390_16778160
Length = 771
Score = 687 bits (355), Expect = 0.0
Identities = 367/371 (98%)
Strand = Plus / Plus
Query: 1 tcttattttaatagttatatacactggtgagcatccttgaaaatacacttgaagtcgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttattttaatagttatatacactggtgagcatccttgaaaatacacttgaagtcgttc 260
Query: 61 acacattctaataccattatatgaaacaggcagtttaggatatttgaagaacagaatatt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaccttctaataccattatatgaaacaggcagtttaggatatttgaagaacagaatatt 320
Query: 121 tattttggagtgagaagaattattagcaacactcctctcccaaccaccccaaaggttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttggagtgagaagaattattagcaacactcctctcccaaccaccccaaaggttctt 380
Query: 181 tcttccaagaacatcatttacttgggaaaaattataattttaattttataaataaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttccaagaacatcatttacttgggaaaaattataattttaattttataaataaaagct 440
Query: 241 aaattatataacaaaaaggatcacacaaatattaagcatctttgtgccttaatctaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattatataacaaaaaggatcacacaaatattaagcatctttgtgccttaatctaaccc 500
Query: 301 cattatgcataagatacactggtgatatatgacaattataatttaattgatatgaacatt 360
|||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||
Sbjct: 501 cattatgcataagatacactggtgatctatgacaattattatttaattgatgtgaacatt 560
Query: 361 acatattaatg 371
|||||||||||
Sbjct: 561 acatattaatg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
