Query= MSMg01no441_a17.b1 MSMg01no441_a17.b1 CHROMAT_FILE:
MSMg01no441_a17.b1 PHD_FILE: MSMg01no441_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:41 2005
(557 letters)
>mm_chr19_23536495_23537451
Length = 957
Score = 712 bits (368), Expect = 0.0
Identities = 389/396 (98%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 108 aacttaaaaaagcatgcatttaattgggggatttcttacaatttcagaggactccatgat 167
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aacttaaaaaagaatgcatttaattgggggatttcttacaatttcagaggactccatgat 898
Query: 168 ctttaaggtggggatcatggcagacagcagacaggcatggaacagtggctgagagcttat 227
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 atttaaggtggggatcatggcagacagcagacaggcatggaacagtggctgagagcttat 838
Query: 228 atctattatacaagcttgaatgatgctggctttctgaaacctcaaagcccacccccagag 287
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 837 atctattatacaagcttgaatgatgttggctttctgaaacctcaaagcccacccccagag 778
Query: 288 acacacctcctccaataaggctgtacctcccaatctttcccaaatagttccaccatatag 347
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acacacctcctccaacaaggctgtacctcccaatctttcccaaatagttccaccatatag 718
Query: 348 aagccatggcatacatttttgttcaaacaaccacaattcttcaatcaaatcaacagaatt 407
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aagccatgggatacatttttgttcaaacaaccacaattcttcaatcaaatcaacagaatt 658
Query: 408 atataatacttggttccatgctaggaattctgatctggtaaggacaatcatttttttcaa 467
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ataaaatacttggttccatgctaggaattctgatctggtaaggacaatcatttttttcaa 598
Query: 468 atcatttttatgtactatttatttatttatttattt 503
||||||||||||||||||||||||||||||| ||||
Sbjct: 597 atcatttttatgtactatttatttatttatt-attt 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_a17.g1 MSMg01no441_a17.g1 CHROMAT_FILE:
MSMg01no441_a17.g1 PHD_FILE: MSMg01no441_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:41 2005
(317 letters)
>mm_chr19_23365633_23366349
Length = 717
Score = 543 bits (281), Expect = e-159
Identities = 308/317 (97%)
Strand = Plus / Plus
Query: 1 taggatagagccagacaggatattagctggaaattcatccatgtggcagaatgtaggtta 60
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 201 taggatagagccagaaaggatatttgctggaaattcagccatgtggcagaatgtaggtta 260
Query: 61 aaataaataggttatcttaagttatgtttctagtcagagaagagcctagctatatggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataaataggttatcttaagttatgtttctagtcagagaagagcctagctatatggcca 320
Query: 121 aggtatttgtaaaaatattttgagtccgagtcttatttctgggagcatcaggctgggaag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aggtatttgtaaaaatattttgagtctgagtcttatttctgggagcatcaggctgggaag 380
Query: 181 aggtactgggtcctaacttcaacaatctcctcctctttttacttcgtatataaccttcca 240
| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 381 aagtactgtgtcctaacttcaacaatctcctcctctttttacttcgtatatgacctttca 440
Query: 241 taacttattaattcctaaaattcatagccccaacactattctagctttcccctcctggct 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taacttaataattcctaaaattcatagccccaacactattctagctttcccctcctggct 500
Query: 301 actctgcccttcatgat 317
|||||||||||||||||
Sbjct: 501 actctgcccttcatgat 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
