Query= MSMg01no446_a18.b1 MSMg01no446_a18.b1 CHROMAT_FILE:
MSMg01no446_a18.b1 PHD_FILE: MSMg01no446_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:28 2005
(254 letters)
>mm_chr19_41921025_41921679
Length = 655
Score = 474 bits (245), Expect = e-138
Identities = 251/253 (99%), Gaps = 1/253 (0%)
Strand = Plus / Plus
Query: 1 caaccttcataatcacaaattaagcaggggaaagcaagcgttgtcaacccaccaacataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaccttcataatcacaaattaagcaggggaaagcaagcgttgtcaacccaccaacataa 260
Query: 61 atctgccaacttatgttcttcaccctagaaccgctctgctctgcaattgtagcaccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgccaacttatgttcttcaccctagaaccgctctgctctgcaattgtagcaccatat 320
Query: 121 tcagaaagcttctgtacccgaaaataacgagatcatatctactattggtttt-caagtat 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tcagaaagcttctgtacccgaaaataacgagatcatatctactattggtttttcaagtat 380
Query: 180 tgttagaagccctcccgattcccgcccctgcgagccacatctataaacaatccaagcacg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttagaagccctcccgattcccgcccctgcgagccacatctataaacaatccaagcaca 440
Query: 240 cgataagggctaa 252
|||||||||||||
Sbjct: 441 cgataagggctaa 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 655
Length adjustment: 9
Effective length of query: 245
Effective length of database: 646
Effective search space: 158270
Effective search space used: 158270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_a18.g1 MSMg01no446_a18.g1 CHROMAT_FILE:
MSMg01no446_a18.g1 PHD_FILE: MSMg01no446_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:28 2005
(243 letters)
>mm_chr19_42069348_42069990
Length = 643
Score = 441 bits (228), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Minus
Query: 1 agaggacagaaagtagacagaagttggccttgggcataaactggctgtgcagagcactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agaggacagaaagtagacagaagttggccttgggcataaactggctgtgcagagcactgt 384
Query: 61 aggctccctcgggcactgcctcccctaggtcccctgggaatcctggtgcggtgaactatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aggctccctcgggcactgcctcccctaggtcccctgggaatcctggtgcggtgaactatg 324
Query: 121 gatgtgcctggaggagtaggtgtggggaggagaaagctgacttanaaaaacaaatcttat 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 323 gatgtgcctggaggagtaggtgtggggaggagaaagctgacttagaaaaacaaatcacag 264
Query: 181 agactcagcaccattcaggctatcacactgtgcgctccctgtggagttggaacagaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agactcagcaccattcaggctatcacactgtgcgctccctgtggagttggaacagaccct 204
Query: 241 ttg 243
|||
Sbjct: 203 ttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
