Query= MSMg01no447_i16.b1 MSMg01no447_i16.b1 CHROMAT_FILE:
MSMg01no447_i16.b1 PHD_FILE: MSMg01no447_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:28 2005
(555 letters)
>mm_chr19_21290008_21290962
Length = 955
Score = 876 bits (453), Expect = 0.0
Identities = 465/471 (98%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 85 aatgttcttttcttccatctggagtaaattgtaagcaacttttgttccagattgctctct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 aatgttcttttcttccatctggagtaaattgtaagcaacttttgttccagattgctctct 896
Query: 145 tttttctttattttacatataaaatgaaatttatggtgagtttttcactcagaattatgg 204
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 895 tttttctttattttacatataaaatgaaatttatggagagtttttcactcagaattatgg 836
Query: 205 acatttaaaaaataaacacacacacacacacacacatacacacacacaaacacatacaca 264
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 acatttaaaaaataa----acacacacacacacacatacacacacacaaacacatacaca 780
Query: 265 caaacacatactcacaaacacacatatcacatcacattacttctgaaatcaagaaaagtc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 caaacacatactcacaaacacacatatcacatcacattacttctgaaatcaagaaaagtc 720
Query: 325 agtgtgcccagtgctgggcaatctttggaatggttacttctcacattcaatggctgtcta 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agtgtgcccagtgctgggcaatctttggaatggttacttctcacattcaatggctgtcta 660
Query: 385 attgagtatttttcaaaattagttctgattgtggtgattggtcaaagggggagaaaaaga 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 attgagtatttttcaaaattagttctgattgtggtgattggtcaaagggggagaaaaaga 600
Query: 445 attcaaagaaggcttatttttcagaacacttttatttaaaaccatctttttaaagaacag 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 attcaaagaaggcttatttttcagaacacttttatttaaaaccatctttttaaagaacag 540
Query: 505 aaggtacatgcggtgatcatactattttagcacagtgggttgaaaacaaaa 555
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 539 aaggtacatgcggtgatcatactattttagcacagagggttgaaaacaaaa 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_i16.g1 MSMg01no447_i16.g1 CHROMAT_FILE:
MSMg01no447_i16.g1 PHD_FILE: MSMg01no447_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:28 2005
(442 letters)
>mm_chr19_21164718_21165559
Length = 842
Score = 847 bits (438), Expect = 0.0
Identities = 441/442 (99%)
Strand = Plus / Plus
Query: 1 taatatcaaatagctaatgcatttagagcaataaattcttcacccagcagttgtgttatc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatatcaaatagctaatgaatttagagcaataaattcttcacccagcagttgtgttatc 260
Query: 61 tggctagttttaaaatattaaggctgtctggtgttttccagctccagcggctcaggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctagttttaaaatattaaggctgtctggtgttttccagctccagcggctcaggtggg 320
Query: 121 caggagaaagggcacagccataaggacagtcattagatgtttggcggaactagccatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggagaaagggcacagccataaggacagtcattagatgtttggcggaactagccatgag 380
Query: 181 gggttggaagagtggtcacagctcccaggagtcagagaaccagctagccgttggcagagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggttggaagagtggtcacagctcccaggagtcagagaaccagctagccgttggcagagc 440
Query: 241 tatgtcgggagtgggaccaggagcagcttgttctcagagccaagctgagagctcagcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgtcgggagtgggaccaggagcagcttgttctcagagccaagctgagagctcagcctt 500
Query: 301 gagaaggtgatgttgtggcttttaaaatcaccctcaacatacccggcctccagaatgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaaggtgatgttgtggcttttaaaatcaccctcaacatacccggcctccagaatgata 560
Query: 361 agatgtaactgttgtataagtccacactagtggtactctgctgaagcagctcaaacgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgtaactgttgtataagtccacactagtggtactctgctgaagcagctcaaacgaac 620
Query: 421 aaatacattgtttctagattca 442
||||||||||||||||||||||
Sbjct: 621 aaatacattgtttctagattca 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
