TCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTAGACTACTAAGCTTTACACCAGTAGAATTGGTATGAATTT
GCCAAAACTTCTTTTCTAAATTAGAATCACAAAACTTGAAATGCAACTAC
CATTGTTTCCAGCATGGAACTCCTCTGGGGAGCAATAAGGGACATGTCTG
CTAGGTCTGGGTCATGATAAAGTGAACAGTTGTCAAATGCACTAAAGTCT
TCGAAGCACTTCAAAGACCAGAATCGCCAGTTGTTTGGATTTACTTGATA
AGCTTTGCTTGATGTGTTTTAATAAAACAGAAACATGAAATTAAAATGAA
ACACAAAATGTCCTTACACAGCAGGGACCTTAGTGTTTTATGCTCAGTGC
TGCTCCTTGGGCCATTTGAAAGTGCTTCTCTTCCTGGACTATGATTTTCA
CAGGTAGTAAGTTTACTGGCCATTGTATTTTCCAGTAGGTTTAAAATGTT
TGGGCATTTTCTTCAGAAAATGATAAAAAGTTAAATTTCGAAATAATTGC
TGTAAATTCTTGTGCAACTGTATCTACCCTCAGGCCACTGGTCCATGATA
CACAACAGCAGTTTTCCAGAGATACATTAAATACTAGGGCTAGTTTTCTT
CTGTTTTGTAGCACTTGCTAGAAAAAGAACCACTGTAGCACAAACGAAAA
CTATCCATTCTGTAGCATCTCTAACAAGGCCTAAGGGTGTGAAATAAACC
CAG

NACGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACTACAGTCAGGTATGGCA
GACTACATTACATATTAAAAGAAAGTTGGTGGGCTCCTCTGTTAAATGGA
GGTTCCCTATGGATACTTAGAATAACAACCAAGTCACACCCATATGCAGG
AATTTACAATGGTCTAGGAAAAAGGAGGGTTGTGTTTTAAGAAGGAACTA
GAGTAAATACTTAGAATAACAGCCAAGTCACTTCCATATACAGAAATTTA
CAATGGCCTAGGGAGAAGGTGGATTATACGATAGACTAGAATTGGAACTA
TAGCTAGGGCGTGAAACCCTTGCCCCTGGCTTCTAAGAATAAGCTGACCT
TAGGTAGGTATGATTTTTATCTCAGTTGTAAACACTGCCTGGTTCTTGCT
AGCTTTTATGTATACATTCCTCTGTTTTGTGTCATTATGCATCAGATGAC
TTCNATGTATCTTGGCTGATGTGTCACCTGACTTCCTTGGTTTCTTCTGA
AAATAAGTCTAATGCTTGTTTTGAGANTTACATTCCNAATCAACACTCCT
CTGGGTCGCGGGCGGGTTGTCATTGGTGAACCCTGGTCCCCTGAAGAATT
GGACCCCGATTTCTCCCTTGGGGGGAAAAACAAAAGGATCCCGCCCGCGG
TCCCACCCTTCAAAAATTTTCTGTGATTTCTTCCCTATGTCTGCCCTGGT
TGGAGGCTTTATGACTN

Query= MSMg01no448_b18.b1 MSMg01no448_b18.b1 CHROMAT_FILE:
MSMg01no448_b18.b1 PHD_FILE: MSMg01no448_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:15 2005
         (532 letters)



>mm_chr19_36533850_36534781
          Length = 932

 Score =  969 bits (501), Expect = 0.0
 Identities = 522/529 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctagactactaagctttacaccagtagaattggtatgaatttgccaaaactt 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctagaatactaagctttacaccagtagaattggtatgaatttgccaaaactt 263

                                                                       
Query: 64  cttttctaaattagaatcacaaaacttgaaatgcaactaccattgtttccagcatggaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 cttttctaaattagaatcacaaaacttgaaatgcaactaccattgtttccagcatgggac 323

                                                                       
Query: 124 tcctctggggagcaataagggacatgtctgctaggtctgggtcatgataaagtgaacagt 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 tcctctggggagcaataagggacatgtctgctagatctgggtcatgataaagtgaacagt 383

                                                                       
Query: 184 tgtcaaatgcactaaagtcttcgaagcacttcaaagaccagaatcgccagttgtttggat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtcaaatgcactaaagtcttcgaagcacttcaaagaccagaatcgccagttgtttggat 443

                                                                       
Query: 244 ttacttgataagctttgcttgatgtgttttaataaaacagaaacatgaaattaaaatgaa 303
           ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 444 ttacttgataagctttgcttgatgtgttttattaaaacacaaacatgaaattaaaatgaa 503

                                                                       
Query: 304 acacaaaatgtccttacacagcagggaccttagtgttttatgctcagtgctgctccttgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acacaaaatgtccttacacagcagggaccttagtgttttatgctcagtgctgctccttgg 563

                                                                       
Query: 364 gccatttgaaagtgcttctcttcctggactatgattttcacaggtagtaagtttactggc 423
           ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 gccatttgaaagtgcttttcttcctggactatgattttcccaggtagtaagtttactggc 623

                                                                       
Query: 424 cattgtattttccagtaggtttaaaatgtttgggcattttcttcagaaaatgataaaaag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cattgtattttccagtaggtttaaaatgtttgggcattttcttcagaaaatgataaaaag 683

                                                            
Query: 484 ttaaatttcgaaataattgctgtaaattcttgtgcaactgtatctaccc 532
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttaaatttcgaaataattgctgtaaattcttgtgcaactgtatctaccc 732


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)