Query= MSMg01no449_a10.b1 MSMg01no449_a10.b1 CHROMAT_FILE:
MSMg01no449_a10.b1 PHD_FILE: MSMg01no449_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:30 2005
(191 letters)
>mm_chr19_7019947_7020537
Length = 591
Score = 290 bits (150), Expect = 3e-83
Identities = 153/154 (99%)
Strand = Plus / Minus
Query: 34 cacacacacacacacaccccacacactggcccagggagtgtctgtctctgcctagcatgg 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cacacacacacacacaccccacacactggcccagggagtgtctgtctctgcctagcatgg 354
Query: 94 gatgggagggaagcaaagaggacacacgttcagctaccttccctccccatggctgtttgc 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gatgggagggaagcaaagaggacacacgttcagctaccttccctccccatggctgtttgc 294
Query: 154 cctggttgtcttcattcacagcagctctccttca 187
|||||| |||||||||||||||||||||||||||
Sbjct: 293 cctggtcgtcttcattcacagcagctctccttca 260
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_a10.g1 MSMg01no449_a10.g1 CHROMAT_FILE:
MSMg01no449_a10.g1 PHD_FILE: MSMg01no449_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:30 2005
(458 letters)
>mm_chr19_6646674_6647531
Length = 858
Score = 855 bits (442), Expect = 0.0
Identities = 455/460 (98%), Gaps = 2/460 (0%)
Strand = Plus / Plus
Query: 1 acccccagaacccacacaaggccgagagagcacagctgttcacatctgtaatcccagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccccagaacccacacaaggccgagagagcacagctgttcacatctgtaatcccagctt 260
Query: 61 tccaaggggaggtgggaggtagggacaggtactgtcctagagtgcacagtagccgatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaaggggaggtgggaggtagggacaggtactgtcctagagtgcacagtagccgatgat 320
Query: 121 cacagcagcttggcagaaacttcttactcagcaaggaagaaagagaagacctactcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcagcttggcagaaacttcttactcagcaaggaagaaagagaagacctactcctaa 380
Query: 181 aaatgatcctctgatctccacaggcatggtgtgacccacgtgcatgcaaacacactcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgatcctctgatctccacaggcatggtgtgacccacgtgcatgcaaacacactcgtg 440
Query: 241 tgagcgcttgtgtgctcgcacacacacatgcacttggaataaaaacattttaaacataat 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagcgcatgcgtgctcgcacacacacatgcacttggaataaaaacattttaaacataat 500
Query: 301 ctaaaagtcattttttagttgaaattgaacaataacagcaagccaacatctggtactgct 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ctaaaagtcattttttagttgaaattgaacaataacagcaagccaacatcaggtactgct 560
Query: 361 gacacagaggggcaactctcctcccctgggtgacaaaggctaaacattgccaagtgccgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacacagaggggcaactctcctcccctgggtgacaaaggctaaacattgccaagtgccgt 620
Query: 421 aaaagattatcaagtgctgttattctttt--attgtttta 458
||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 aaaagattatcaagtgctgttattcttttttattgtttta 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
