TTGCTCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGG
AGCCGCGGAATTCCATGCCTTGCANAAACATGGCTCAGTATAAATGCTCA
TGAGATGTACTTTAATGAATTTCATGCCATGTGAACTGGGGGCCTTGTAT
TTTGGCCATTTTTTTCTCTGTGTATGCTTGAAAATAAGTATACATGAAGA
GAACAATAAGCACAGAAAGAAGAAATATGTTTAAGACTGCCTCTGTTGCT
GTGTGAACAACTTCCCCTCCATGATGCAGGAACTATCACAAAAATTATCT
ATTTGTCATTAAAGACATTGAGAACGTCTATCAGGTCTAGATAGGGTAGC
ATTACAGGAATTTCCATTGCATCCCTGCCATGCATTAGAGACCCACATTA
TCTCAAGGCTTTAATGGTCACAAATAGTTTGTGTTAACTGTGTGCTAAGA
TCTGATCTGGACAATTATGCACTATTCACTTCATTTTAATACTGAGAAGT
CCCCAAAATGTCTGATGCTACCTTCTAAGAAGGGAGATATCAGGAGGTGG
TCAGTATTCTCTGAGAGGTGGAACTGGCCAGGATGTATGTTCCCAGGGAG
ATGGAAACAGATGTCTTCCCAGCTTGGATAGAGCATCAGTGAAGGAGCAC
AAGGAATTATTCCTCCCAAGTCTAGCTTGGTAAAACAGTGAGTTTACTGG
TAGCACTCACAGGAACATGACCAATATTTCTT

NNNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAACAT
GAGGTNGAACTATAGAAGGTTTCGCAAAATTCTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACCTGAAAAAATGCTCACCATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA
AGAGGAACACTCCTTCATTGTTGGTGGGATTGCAGGCTTGTACAACCACT
CTGGAGATCAGTCTGGCGGTTCCTCATAATANGGATATAGTACTACCGGA
GGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAGATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACT
GATAAGTGGATATTATTCCTTTACCTAAGATACCCAAGATATAAGATACA
ATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACG

Query= MSMg01no449_p14.b1 MSMg01no449_p14.b1 CHROMAT_FILE:
MSMg01no449_p14.b1 PHD_FILE: MSMg01no449_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:44 2005
         (577 letters)



>mm_chr19_54735242_54736218
          Length = 977

 Score = 1077 bits (557), Expect = 0.0
 Identities = 572/577 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggctcagtataaatgctcatgagatgtactttaatgaatttcatgccatgtgaactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 catggctcagtataaatgctcatgagatgtactttaatgaatttcatgccatgtgaactg 718

                                                                       
Query: 61  ggggccttgtattttggccatttttttctctgtgtatgcttgaaaataagtatacatgaa 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggggccttgtattttggccacttttttctctgtgtatgcttgaaaataagtatacatgaa 658

                                                                       
Query: 121 gagaacaataagcacagaaagaagaaatatgtttaagactgcctctgttgctgtgtgaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gagaacaataagcacagaaagaagaaatatgtttaagactgcctctgttgctgtgtgaac 598

                                                                       
Query: 181 aacttcccctccatgatgcaggaactatcacaaaaattatctatttgtcattaaagacat 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 597 aacttcccctccatgatgcaggaactaccacaaaaattatctatttgtcattaaagacat 538

                                                                       
Query: 241 tgagaacgtctatcaggtctagatagggtagcattacaggaatttccattgcatccctgc 300
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgagaatgtctaacaggtctagatagggtagcattacaggaatttccattgcatccctgc 478

                                                                       
Query: 301 catgcattagagacccacattatctcaaggctttaatggtcacaaatagtttgtgttaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 catgcattagagacccacattatctcaaggctttaatggtcacaaatagtttgtgttaac 418

                                                                       
Query: 361 tgtgtgctaagatctgatctggacaattatgcactattcacttcattttaatactgagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgtgtgctaagatctgatctggacaattatgcactattcacttcattttaatactgagaa 358

                                                                       
Query: 421 gtccccaaaatgtctgatgctaccttctaagaagggagatatcaggaggtggtcagtatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtccccaaaatgtctgatgctaccttctaagaagggagatatcaggaggtggtcagtatt 298

                                                                       
Query: 481 ctctgagaggtggaactggccaggatgtatgttcccagggagatggaaacagatgtcttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctctgagaggtggaactggccaggatgtatgttcccagggagatggaaacagatgtcttc 238

                                                
Query: 541 ccagcttggatagagcatcagtgaaggagcacaagga 577
           |||||||||||||||||||||||||||| ||||||||
Sbjct: 237 ccagcttggatagagcatcagtgaaggaccacaagga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)