Query= MSMg01no450_p23.b1 MSMg01no450_p23.b1 CHROMAT_FILE:
MSMg01no450_p23.b1 PHD_FILE: MSMg01no450_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:06 2005
(453 letters)
>mm_chr19_57699429_57700283
Length = 855
Score = 760 bits (393), Expect = 0.0
Identities = 439/455 (96%), Gaps = 2/455 (0%)
Strand = Plus / Minus
Query: 1 ccactcactaagcctgggccatgcttaccaagcaagatgtctacttcagacgaaggacga 60
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 655 ccactcactaagcctgggctatgcttaccaagcaagatgtcaacttcagacgaaggacga 596
Query: 61 tcagttgtactctcagccgtcggccacaaggggcctgctcttatttctg--ctttcagaa 118
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 595 tcagttgtactctcagccgtcggccacaaggggcctgctctcatttctgctctttcagaa 536
Query: 119 ttctcattctcttatccctctaactagtaacattaaattttcttaagactatgagattct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttctcattctcttatccctctaactagtaacattaaattttcttaagactatgagattct 476
Query: 179 ttttcctaaatatattaaaaccaagtacagtaataacaagtcactgcaaaataaatggac 238
||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 475 ttttcctaaatatgttaaaaccaagtacagtaatgccaagtcactgcaaaataaatggac 416
Query: 239 aataacatacctctttgtacccaaaatgctgaccatatcaaatatgggcaaagaggtagg 298
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aataacatatctctttgcacccaaaatgctgaccatatcaaatatgggcaaagaggtagg 356
Query: 299 ggaaaattctcatgggaataatttagcacaacttcataaaataatgtgtttctatcttaa 358
||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 355 ggaaaattctcatgggaataatttagcacaacttcataaaataatatgctgctatcttaa 296
Query: 359 tagttaaagataggcacgctgcagtgctatgattgacagtagcagtgctgtgctcacacc 418
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tagttaaagataggcacactgcagtgctatgattgacagtagcagtgctgtgctcacacc 236
Query: 419 acagtgcagtggctggcagtgggagtgcagtgctc 453
|||||||||||||||||||||| ||||| ||||||
Sbjct: 235 acagtgcagtggctggcagtggcagtgctgtgctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 855
Length adjustment: 10
Effective length of query: 443
Effective length of database: 845
Effective search space: 374335
Effective search space used: 374335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_p23.g1 MSMg01no450_p23.g1 CHROMAT_FILE:
MSMg01no450_p23.g1 PHD_FILE: MSMg01no450_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:06 2005
(150 letters)
>mm_chr19_57529229_57529778
Length = 550
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Plus
Query: 1 aaaatagactctcgtgagttaccttttgagggtattttattacagcgttaatgacactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatagactctcgtgagttaccttttgagggtattttattacagcgttaatgacactag 260
Query: 61 cgcatcggattttaggggacattgaactgaggacttgcatcaaaaggaatcattgtgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgcatcggattttaggggacattgaactgaggacttgcatcaaaaggaatcattgtgatg 320
Query: 121 gggtgtttgtttgtttgttgtttttt 146
|||| |||||||||||||||||||||
Sbjct: 321 gggtatttgtttgtttgttgtttttt 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
