CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGGTTTCTACCTAAACATGATAAAAGCAATTTACACCAAATCAGT
AGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAACAATCCCACTAAAAT
CAGGGACTGGACAAGGCTGCCCACTTTCTCCCTACCTATTCAACATTTTA
CTTGAAATCCTAGCCAGAGCAATTCGACATCAAAAGGAGATCAAGGGAAT
GCAAATTGGAAAGGAAGAAGTCAAAATATCAGTTTTTGCAGATGATATGA
TAGTATTTATGTGACCCTAAAAACTCCACTAGAGAATCCCTAAACCTGAT
AAACATCTTCAATGAAGTAGCTGGATATAATATTAACTCAAACAAGTCAA
TGGCCTTTTTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAA
AGAACTCCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTGAC
TCTAACTAAGGAAGCAAAAGATCTGTATGATAAGAACTTCAAGTCTCTGA
AGAAAGAAATTAAAGAAGATCTCAGAAGATAGAAAGATCTCCCATGCTCA
TGGATTGGCAGGATCAGTACAGTAAAAGTGGCTATCTTGCCATAAGCAAT
CTACAGATTCAATTCAATCCCCATCAAGAATCCAACTCAATTCTTCAACG
AAATAGAAAGGGCAATCTGCAAATTCATCTGGAATAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTTTTGGGCTACATGACCCCAGGTGACATTTCCT
TATATGGGAAGGGTGGCATGTATTCCAGGTCAAGAATCTGGCAGAGAGCA
AGGAGCCACCTACCATCTTAGGTGGGTGCCCAGAGTCTGGGACTCTGAAC
CTGCTCAACCTACCAAGTTTCCTGGCATGGCCCACTGCTACACAGGGCAG
TACTTTTGAGTTTTGTCCTTTTTGTACTTAAAAACTGCCAAGTTGCCAGT
CTTCCTGTGGAAATTTAGAAAGTATCTCTCCCACCACCTTTAGTAATGTA
ATTATGAGATTTTGGGCTTCAGTTATAGGGCAAGCTTTTGATAACAGGGA
GATTGATTGAAACTCTACCTTCTATTGCTGAAGCAAATTTTTTGCTTTTT
GAGTAGATAAGATAAATTACCAAATAAATGTTTATTATAATATGATCAAA
TCACAATTTCTCTCAGAANATTAGTAATTTAGTTAANATAGAAAGGCTTA
TTAAATACTGGGATTTAGCTGTCTGGAATTAAATATTATAAATATAACAA
TGCATTACATATATTACAACCAATAATTTTATCCCAGGTAATAAACTGAT
AGAAGGTTAACCTATAAAAGAAAAATACCCATTTCTATATTATATAAAAT
ATTTAATTCAGTTTTCCACCCCTCTACTCCTCG

Query= MSMg01no455_m20.g1 MSMg01no455_m20.g1 CHROMAT_FILE:
MSMg01no455_m20.g1 PHD_FILE: MSMg01no455_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:25 2005
         (487 letters)



>mm_chr19_39549049_39549941
          Length = 893

 Score =  663 bits (343), Expect = 0.0
 Identities = 455/501 (90%), Gaps = 17/501 (3%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttttgggctacatgaccccaggtgacatttccttatatgggaagggtggcatgtattcca 62
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ttttgggctacatgaccacaggtgacatttccttatatgggaagggtggcatgtattcca 719

                                                                       
Query: 63  ggtcaagaatctggcagagagcaaggagccacctaccatcttaggtgggtgcccagagtc 122
           || |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 718 ggacaagaatctggcagggagcaaggagccacctaacatcttaggtgggtgtccagagtc 659

                                                                       
Query: 123 tgggactctgaacctgctcaacctaccaagtttcctggcatggcccactgctacacaggg 182
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 agggactctgaacctgctcaacctaccaagtttcctggcatggcccactgctacacaggg 599

                                                                       
Query: 183 cagtacttttgagttttgtcctttttgtacttaaaaactgccaagttgccagtcttcctg 242
           |||||||||||||||||| || |  |||||||||||||||| ||||||||||||||||||
Sbjct: 598 cagtacttttgagttttgcccataatgtacttaaaaactgcaaagttgccagtcttcctg 539

                                                                       
Query: 243 tggaaatttagaaagtatctctcccaccacc-tttagtaatgtaa-ttatgagattttgg 300
           || ||||||||||||| ||||||||||| || ||||||||||||| ||||| ||||||||
Sbjct: 538 tgaaaatttagaaagtgtctctcccacc-ccatttagtaatgtaacttatgggattttgg 480

                                                                       
Query: 301 gcttcagttatagggcaagcttttgataacagggagattgattgaaactctaccttctat 360
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 479 gcttcagttatagggcaggcttttgataatagggagattgattgaaactctactttcaat 420

                                                                       
Query: 361 tgctgaagcaaatttttt-----gctttttgagtagataagataaattaccaaataaat- 414
           ||||||||||| ||||||     ||||||||||||||||| || |||||||||| |||  
Sbjct: 419 tgctgaagcaattttttttttttgctttttgagtagataaaatgaattaccaaaaaaaaa 360

                                                                       
Query: 415 --------gtttattataatatgatcaaatcacaatttctctcagaanattagtaattta 466
                   |||||| |||||| |||||||||||||||||| |||||| ||||||||||||
Sbjct: 359 aaaaaacagtttatcataatacgatcaaatcacaatttctgtcagaaaattagtaattta 300

                                
Query: 467 gttaanatagaaaggcttatt 487
           ||||| |||| ||||||||||
Sbjct: 299 gttaaaataggaaggcttatt 279


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 893
Length adjustment: 10
Effective length of query: 477
Effective length of database: 883
Effective search space:   421191
Effective search space used:   421191
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)