TGGTTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACAACAATTCACTCTTGAATGGCTGAGAAGCACTTAAA
GAAATGTTCAAAGTCCTTAGTCATCAGGGAAATGCAAATCAAAATGACCC
TGAGATTCCACCTTCCACTAATCAGAATGGCTAAGATAAAAACTCAAGTG
ACATCACAAGTAGGAGGGAATGTGGAGAAAGAGGAACAGTGCTCCATTGC
TTATGGGATTTAAAACTGGTACAACCACTCTGGAAATCAATCTGGAGGTT
CCTCAGAAAATTGGATATATATCTACCCGAAGATCAAGCAATACCACTCT
TGGGCATATACCCAAAACATGCCCCACCATGCCTCAGGGTCACCTGTTCC
ACTGTGTTCATAGTAGCTGTGTTTGTGATAGCCAGAGCAGAAAACAACCC
AGATGTTCCTCAGCTGAAGAATGGATACAGTGGGCATGGTTCATTTGCAC
GATGGAATACCATTCAGCTATTAAGAAAAAGGACATGATGACTTTTGCAG
GCAAATGAATGGAACTAGAAAATATCATCTTGAGTCAGGTAACTCAGAAC
CAAAAGGACGTGCATAGAATGTACTCCCCAAAAAATGGGATATTAGTTTA
AAAAGTACTTAGTACCCTAGAAACCATTCCCCCAAAACTCTAAAAAAATA
ATAAAGCTGAATTGGCCTAATGGAAAAGGCTTCCCTTC

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGCTGAGAAATACCAA
ATGGATGAGAAGCACCTAAAAAAATGTTCAACATCCTTAGTCATGAGAGA
AATGCAAATCAAAACAACCCTGAGATACAGCCTCACAACACTCAGAATGA
CTAAGATCAAAAACTCAGGTGGCAGCAGATGCTGGTGAGGATGTGGAGAA
AGAGAAGCACTCCTCCATTGCTGGTGGGATTGAAAGCTGGTACAACCAAT
TTGGAAATCAGTTTGGCAGTTCCTCTGAAAATTTGACATAGTATTACCTG
AAGATCTTTCTAATGAAAATAAATTTAAATTTAAAACAAGAGGTGGAGAG
ATTACAATGCTTGGGGGGGGGCATGAAGTTAAATATGTGGGAGCAAGTTT
AAGAGACATGCGGATGAGTGAGGAGAAATAGCTTTCATTTAATCAGGTTC
CCAGAGGGAGTGGGGCTGAAAGAGCATGTGAAGAATGCCCGAGGATTTTG
AAAAACTGGTAATTTTCATGATTTAAAAAGACCTTAGAAGTCCGATATGG
GGGGGGTTTATTATTATTATTAACATTATTTTTTTTTCTACTTATTTTTT
CTTCCGCTTTCGCCTCTTCTTTTTTTTTTTTCTTTATCCTTTACTTTTCC
CGATTTTTCTCTTACTTTTTATTTCCCTTTTTTTTTTTCCCCTTTTTGTT
CTTTTAN

Query= MSMg01no457_a10.g1 MSMg01no457_a10.g1 CHROMAT_FILE:
MSMg01no457_a10.g1 PHD_FILE: MSMg01no457_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:04 2005
         (424 letters)



>mm_chr19_35751915_35752735
          Length = 821

 Score =  743 bits (384), Expect = 0.0
 Identities = 413/424 (97%), Gaps = 3/424 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagctgagaaataccaaatggatgagaagcacctaaaaaaatgttcaacatccttagtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagctgagaaataccaaatggatgagaagcacctaaaaaaatgttcaacatccttagtc 260

                                                                       
Query: 61  atgagagaaatgcaaatcaaaacaaccctgagatacagcctcacaacactcagaatgact 120
           ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 261 atgagagaaatacaaatcaaaacaaccctgagataccgcctcacaacagtcagaatgact 320

                                                                       
Query: 121 aagatcaaaaactcaggtggcagcagatgctggtgaggatgtggagaaagagaagcactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatcaaaaactcaggtggcagcagatgctggtgaggatgtggagaaagagaagcactc 380

                                                                       
Query: 181 ctccattgctggtgggattgaaagctggtacaaccaatttggaaatcagtttggcagttc 240
           |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 381 ctccattgctggtgggattgaaagctggcacaaccaatctggaaatcagtttggcagttc 440

                                                                       
Query: 241 ctctgaaaatttgacatagtattacctgaagatctttctaatgaaaataaatttaaattt 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgaaaattagacatagtattacctgaagatctttctaatgaaaataaatttaaattt 500

                                                                       
Query: 301 aaaacaagaggtggagagattacaatgcttgggggggggcatgaagttaaatatgtggga 360
           ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |
Sbjct: 501 aaaacaagaggtggagagattacaatgcttgggggg---catgaagttaaatatgtggaa 557

                                                                       
Query: 361 gcaagtttaagagacatgcggatgagtgaggagaaatagctttcatttaatcaggttccc 420
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcaagtttaagagatatgcggatgagtgaggagaaatagctttcatttaatcaggttccc 617

               
Query: 421 agag 424
           ||||
Sbjct: 618 agag 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 821
Length adjustment: 9
Effective length of query: 415
Effective length of database: 812
Effective search space:   336980
Effective search space used:   336980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)