Query= MSMg01no458_e13.b1 MSMg01no458_e13.b1 CHROMAT_FILE:
MSMg01no458_e13.b1 PHD_FILE: MSMg01no458_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:50 2005
(622 letters)
>mm_chr19_21441600_21442621
Length = 1022
Score = 959 bits (496), Expect = 0.0
Identities = 587/626 (93%), Gaps = 20/626 (3%)
Strand = Plus / Plus
Query: 1 tggacattactaagatggatttatgtttgccctcatgggtgttggtcagcacttttcaca 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tggacattactaagatggatttatgtttgctctcatgggtgttggtcagcacttttcaca 260
Query: 61 catgagcctttcccacgctcacagctggcattacgaacctgtttgaggtaacagttgctc 120
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgagcctttcccatgctcacggctggcattacgaacctgtttgaggtaacagttgctc 320
Query: 121 cggccttcaggggaagcttttctgacagcctggctcttggccagcatggctaccctattc 180
||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 321 cggccttcaggggaagcttttctgacagcttgtctcttggccagcatggctaccctagtc 380
Query: 181 tgtttgcaggagagtcagggagaatcaatatttgttttgttttgttttgtccttttctgt 240
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tgtttgcaggagagccagggagaatcaatatttgttttgttttgt-----ccttttctgt 435
Query: 241 tttatt-gtcttaaaaaca-caacataggttctgtagacatactctatgcctttgttcct 298
||| || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 436 tttgtttgtcttaaaaacaacaacacaggttctgtagacatactctatgcctttgttcct 495
Query: 299 ttctggggccacagtcacctcttcctttagctggctcatgcaatattctctcactgtcta 358
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 ttctggggccacagtcacctcttcctttagctggctcatgca-tattctctcactgtcta 554
Query: 359 tggaaccctgggttt-gatgtttggaaagcctgcagaacctgaaggttttggtaggagcc 417
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 555 cggaaccctgggttttgatgtttggaaagcctgcagaacatgaaggttttggtaggagcc 614
Query: 418 cttaacaaagcatattacaattttgtgttgactgtgagccaggctgtgacgaatgaaggt 477
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 615 tttaacaaagcatattacaattttgtgttgactgtgagccaggctgtgatgaatgaaggt 674
Query: 478 atatatatatatatatgtattgcctaacagacattttccaaaggttcacaagtgacatga 537
||||| ||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 675 gtatat----------gtattgcctaacagacattttccaaaggttcaccagtgatatga 724
Query: 538 aatcagatggctggt-tgtaaagtgtattttccccaaagaatcggctatttctagggtaa 596
||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||
Sbjct: 725 aatcagatggctggtgtgtaaaatgtatttttcccgaagaatcggctatttctagggtaa 784
Query: 597 tgaacactaaaatcccatgttcccaa 622
||||||||||||||||||||||||||
Sbjct: 785 tgaacactaaaatcccatgttcccaa 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_e13.g1 MSMg01no458_e13.g1 CHROMAT_FILE:
MSMg01no458_e13.g1 PHD_FILE: MSMg01no458_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:50 2005
(325 letters)
>mm_chr19_21615889_21616613
Length = 725
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%)
Strand = Plus / Minus
Query: 1 gaattctatctttcaaaagaaaacagagaaatatcatgaccgagacaagaaatagtaaaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 429 gaattctatctttcaaaagaaaacagagaaatatcatgacggagacaagaaatagtaaaa 370
Query: 61 gaaaatcccgatgaattgtatcttataaatgcttaaaaaaaccaaaacaaaccctttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaaaatcccgatgaattgtatcttataaatgcttaaaaaaaccaaaacaaaccctttcta 310
Query: 121 caaaagacagtttacaaaattgaggtgaggagctactaacaaggagaaaatatttgtaaa 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 309 caaaagacagtttacaaaattgaagtgaggagctactaacaaggagaaaatatttgtaaa 250
Query: 181 atcatggttgatgaaaatcttgtattaaaacaaaaactttcaaaacacttgtattggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atcatggttgatgaaaatcttgtattaaaacaaaaactttcaaaacacttgtattggctg 190
Query: 241 gttttgtgtcaacttgacacagctggagttatcacagagaaaggagcttcagttgaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gttttgtgtcaacttgacacagctggagttatcacagagaaaggagcttcagttgaggaa 130
Query: 301 gtgcctccatgaaatctagctgtgg 325
|||||||||||||||||||||||||
Sbjct: 129 gtgcctccatgaaatctagctgtgg 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
