Query= MSMg01no462_a03.b1 MSMg01no462_a03.b1 CHROMAT_FILE:
MSMg01no462_a03.b1 PHD_FILE: MSMg01no462_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:50 2005
(386 letters)
>mm_chr19_55889790_55890575
Length = 786
Score = 692 bits (358), Expect = 0.0
Identities = 379/386 (98%)
Strand = Plus / Minus
Query: 1 aagatcctcctgttgatcccttacaactaaacctcttccaaactggagccagaataaccc 60
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 586 aagatcctcctgttcatcccttacaactaaatctcttccaaactggagccagaataaccc 527
Query: 61 aaagtgtaaaaccactgaagagagttttcagggtacccccagcttggtcttcagccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaagtgtaaaaccactgaagagagttttcagggtacccccagcttggtcttcagccagaa 467
Query: 121 ggctctgggaatctgttttgccctgcctcaccctgacttttcccattcacacttgccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ggctctgggaatctgttttgccctgcctcaccctgacttttcccattcacacttgccaca 407
Query: 181 taactacaggggccgcattggtcagaaccactcaatagagtcatttccttgaggccaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 taactacaggggccgcattggtcagaaccactcaatagagtcatttccttgaggccaacc 347
Query: 241 aaaaatgattactggccagcactacctctccgcctcgcaagaacccacacacagctctgc 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaaaatgaacactggccagcactacctctccgcctcgcaagaacccacacacagctctgc 287
Query: 301 agagccggacagccacgcccacacctcctgccttgctctggtgggagggcctgatgaatg 360
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 286 agagccggacagccacgcccacacctcctgccttgctccggtgggagggtctgatgaatg 227
Query: 361 ggcaagttttcatctttgaccatctg 386
|| |||||||||||||||||||||||
Sbjct: 226 ggtaagttttcatctttgaccatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_a03.g1 MSMg01no462_a03.g1 CHROMAT_FILE:
MSMg01no462_a03.g1 PHD_FILE: MSMg01no462_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:50 2005
(424 letters)
>mm_chr19_55647015_55647844
Length = 830
Score = 774 bits (400), Expect = 0.0
Identities = 420/430 (97%), Gaps = 6/430 (1%)
Strand = Plus / Plus
Query: 1 taggaaacacgacctctcgttcccccaagacccagccaagtcatccatagttgtttggtt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 taggaaacacgacctctcgttcccccaagacccagccaagtcatccgtagttgtttggtt 260
Query: 61 gttaatgaagtctggccaagtgtgcacatggaggctcctgtagaatggccttaatttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaatgaagtctggccaagtgtgcacatggaggctcctgtagaatggccttaatttgtg 320
Query: 121 cttaggaatgcttaattttatcagcacccctgtaattagatattgtgcaaagggatgaa- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaggaatgcttaattttatcagcacccctgtaattagatattgtgcaaagggatgaag 380
Query: 180 -----gcactgctgttgcatggagcagtggcctgaagctccttgctatctttgagatagc 234
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gataggcactgctgttgcatggagcaatggcctgaagctccttgctatctttgagatagc 440
Query: 235 gagggtttccatagacacatgtgtcacgtgggtttgcttgcatacacatccaagaagaga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagggtttccatagacacatgtgtcacgtgggtttgcttgcatacacatccaagaagaga 500
Query: 295 atgaaaatttcccagttggctttcccctctctaagggtaggtttttaaatacatgaatcg 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaaaatttcccagttggctttcccctctctaagggtaggtttttaaatacatgaatcc 560
Query: 355 ctgctcgctcacttcttgctctcttctttgctgttacctcctggatgcttggctctgccc 414
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctcgctcacttcctgctctcttctttgctgttacctcctggatgcttggctctgccc 620
Query: 415 ccattgtctg 424
||||||||||
Sbjct: 621 ccattgtctg 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 830
Length adjustment: 9
Effective length of query: 415
Effective length of database: 821
Effective search space: 340715
Effective search space used: 340715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
