Query= MSMg01no463_b16.b1 MSMg01no463_b16.b1 CHROMAT_FILE:
MSMg01no463_b16.b1 PHD_FILE: MSMg01no463_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:22 2005
(244 letters)
>mm_chr19_9995753_9996396
Length = 644
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 5 aataattcttcaaacatactcagggcaaagttgtggtaaaaacactaagatgttcccagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aataattcttcaaacatactcagggcaaagttgtggtaaaaacactaagatgttcccagc 264
Query: 65 ttaaggcaatgcaaaccctatcatccagaaagcggccgttcctgtgctgagtcagctcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaggcaatgcaaaccctatcatccagaaagcggccgttcctgtgctgagtcagctcca 324
Query: 125 gagaaactgagacctgaaagctgagaacagagggaaggcagtctgaggtcatcacgcgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagaaactgagacctgaaagctgagaacagagggaaggcagtctgaggtcatcacgcgtc 384
Query: 185 cacaaacatatatcgagttacccagtgaatactgtgggtaccatttgcagtaccacga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacaaacatatatcgagttacccagtgaatactgtgggtaccatttgcagtaccacga 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no463_b16.g1 MSMg01no463_b16.g1 CHROMAT_FILE:
MSMg01no463_b16.g1 PHD_FILE: MSMg01no463_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:22 2005
(529 letters)
>mm_chr19_10200813_10201741
Length = 929
Score = 969 bits (501), Expect = 0.0
Identities = 522/529 (98%)
Strand = Plus / Minus
Query: 1 accctcgtggttgcagtcaggctcattcaactcaggccaggggctgtgcctgcagagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 accctcgtggttgcagtcaggctcattcaactcaggccaggggctgtgcctgcagagagg 670
Query: 61 gggactttggggctttttgagcatgaactatgattagcaggaagctgggaccaaatccac 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggcactttggggctttttgagcatgaactatgattagcaggaagctgggaccaaatccac 610
Query: 121 aagaccttgtcacagcaagatacatgctgtggcaccaccacggccagcaaatcagaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aagaccttgtcacagcaagatacatgctgtggcaccaccacggccagcaaatcagaatcc 550
Query: 181 aagtacagagggcacagaaatccccaagtaatcaggccaggtttgtgcttacaggagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aagtacagagggcacagaaatccccaagtaatcaggccaggtttgtgcttacaggagggc 490
Query: 241 tgaggtttatctaaggggttggagattcactacacattctgcagtctacttgaaatggag 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgaggcagagctaaggggttggagattcactacacattctgcagtctacttgaaatggag 430
Query: 301 caagcctttttacaaccatacacattgttggaacgaggctgtcaacagttcaaaagcctg 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 caagcctttttacaaccacacacattgttggaacgaggctgtcaacagttcaaaagcctg 370
Query: 361 tttggcttacccaatcagtctagtgggcaccaagaacagcctcctgtcttgctacaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tttggcttacccaatcagtctagtgggcaccaagaacagcctcctgtcttgctacaaggg 310
Query: 421 caacaggaggaagtggagagtcagagcagctcagtctcgcagtgacatccaagtgctggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caacaggaggaagtggagagtcagagcagctcagtctcgcagtgacatccaagtgctggg 250
Query: 481 caaatcatttctctagcactgtgcactcatgggtaaaacagggccaacc 529
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caaatcatttttctagcactgtgcactcatgggtaaaacagggccaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
