Query= MSMg01no463_g11.b1 MSMg01no463_g11.b1 CHROMAT_FILE:
MSMg01no463_g11.b1 PHD_FILE: MSMg01no463_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:48 2005
(440 letters)
>mm_chr19_33334415_33335254
Length = 840
Score = 835 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Plus
Query: 1 ccattatttcctgtacttgttgacatgtgatatatttgctctacaacaacattagccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccattatttcctgtacttgttgacatgtgatatatttgctctacaacaacattagccatg 260
Query: 61 agtttcttggatagtcacttaacatttctaagtttgttttcttttaagaaactgggcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtttcttggatagtcacttaacatttctaagtttgttttcttttaagaaactgggcata 320
Query: 121 ataggcataatctctatcaggctatactgtgtggatcaaactgaccatgatatatgattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataggcataatctctatcaggctatactgtgtggatcaaactgaccatgatatatgattg 380
Query: 181 tggaatattctggaaaggtgactatataatgcaaacacagagtctagaaacaaagacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaatattctggaaaggtgactatataatgcaaacacagagtctagaaacaaagacttg 440
Query: 241 gtcagaatttctagaactcaagtctgtagaaacagtctttaagttacccttagcaattca 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcagaatagctagaactcaagtctgtagaaacagtctttaagttacccttagcaattca 500
Query: 301 cttatttttggtgccagtagaaaacactaggggcctacacatgcacggttctgaagataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttatttttggtgccagtagaaaacactaggggcctacacatgcacggttctgaagataa 560
Query: 361 acctgaagatgtttagacaagtattcaaccttgcagtgcctggtctggagaatgaaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acctgaagatgtttagacaagtattcaaccttgcagtgcctggtctggagaatgaaagtt 620
Query: 421 aagatttgatcaaaatggct 440
||||||||||||||||||||
Sbjct: 621 aagatttgatcaaaatggct 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_g11.g1 MSMg01no463_g11.g1 CHROMAT_FILE:
MSMg01no463_g11.g1 PHD_FILE: MSMg01no463_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:48 2005
(196 letters)
>mm_chr19_33487298_33487892
Length = 595
Score = 335 bits (173), Expect = 1e-96
Identities = 188/193 (97%), Gaps = 1/193 (0%)
Strand = Plus / Minus
Query: 1 ttcttacctaccgtacttttcaataggctgcctcaacatgtgtgctatatccaagttggt 60
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 355 ttcttacctaccgtacttttcaataggctgcctcaacatgtgtgcgatat-taagttggt 297
Query: 61 caatgctggatgtgctactgtactgggctcactgactggatattctccagagcagtgaaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 caatgctgggtgtgctactgtactgggctcactgactggatattctccagagcagtgaaa 237
Query: 121 tatggtaggtgttgctttctttcaaattcatcactggtgtgtgtgtgtgtgtgtgtgtgt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tatggtaggtgttgctttttttcaaattcatcactggtgtgtgtgtgtgtgtgtgtgtgt 177
Query: 181 gtgtgtgtgtgtg 193
|||||||||||||
Sbjct: 176 gtgtgtgtgtgtg 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 595
Length adjustment: 8
Effective length of query: 188
Effective length of database: 587
Effective search space: 110356
Effective search space used: 110356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
