Query= MSMg01no464_c02.b1 MSMg01no464_c02.b1 CHROMAT_FILE:
MSMg01no464_c02.b1 PHD_FILE: MSMg01no464_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:47 2005
(407 letters)
>mm_chr19_60333351_60334157
Length = 807
Score = 694 bits (359), Expect = 0.0
Identities = 392/405 (96%), Gaps = 8/405 (1%)
Strand = Plus / Minus
Query: 5 gaattctcgaggtg---ccggaaagaaccaaatctaacctccacattcacatcatgtcac 61
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaattctcgaggtgaaa--ggcaagaaccaaatctaacctccacattcacatcatgtcac 548
Query: 62 atactatctcccaaatagataaatacatctttttctcttaaagaatcatgtcaacaattt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 547 atactatctcccaaatagataaatacatctttttctcttaaagaatcatgtcaacaa-tt 489
Query: 122 tatgattttcagaccccagctaaagaatgcagctaagatcacacatgattggtagtacat 181
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 488 tatgattttcagaccccagctaaagaaagcagctaagatcacacatgattggcagtacat 429
Query: 182 ggagattctgagtatatgagagcaaacactttgctgtgttgcaattaatatctttcatat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggagattctgagtatatgagagcaaacactttgctgtgttgcaattaatatctttcatat 369
Query: 242 cctaaatacttgtttataccctgaatctaaatattattgatgcttcagacatggaattat 301
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 368 cctaaatacttgtttataccctgaatctaaacattagtgatgcttcagacatggaattat 309
Query: 302 gatgtagaattataccccagtaaagagaagccatctttaacctcatgtccttgaggtgat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gatgtagaattataccccagtaaagagaagccatctttaacctcatgtccttgaggtgat 249
Query: 362 tatgatc-atagttactatttctatgtagcttattgggactattt 405
||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 248 tatga-caatagttactatttctatgtagcttattgggactattt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_c02.g1 MSMg01no464_c02.g1 CHROMAT_FILE:
MSMg01no464_c02.g1 PHD_FILE: MSMg01no464_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:47 2005
(230 letters)
>mm_chr19_60170877_60171506
Length = 630
Score = 445 bits (230), Expect = e-129
Identities = 230/230 (100%)
Strand = Plus / Plus
Query: 1 tttccttcaagaggacaaaatcagaagagaattctctcattcttaacacttcattctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccttcaagaggacaaaatcagaagagaattctctcattcttaacacttcattctact 260
Query: 61 ggatggtggaagccatgtcctcctcactgtacactctctactcaatcagggttcaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatggtggaagccatgtcctcctcactgtacactctctactcaatcagggttcaagcag 320
Query: 121 acaccataactcagggactggaattggagtggaaagagtggacatgaaagacagagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaccataactcagggactggaattggagtggaaagagtggacatgaaagacagagaaag 380
Query: 181 aataggatgggggaatctgagaaaggagggaaggaagggagagatgagag 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataggatgggggaatctgagaaaggagggaaggaagggagagatgagag 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
