Query= MSMg01no468_h17.b1 MSMg01no468_h17.b1 CHROMAT_FILE:
MSMg01no468_h17.b1 PHD_FILE: MSMg01no468_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:43 2005
(436 letters)
>mm_chr19_45045714_45046549
Length = 836
Score = 795 bits (411), Expect = 0.0
Identities = 429/437 (98%), Gaps = 6/437 (1%)
Strand = Plus / Minus
Query: 1 aattcataaata-ttccacaaattctgacttagaactcataaatttatatttcttaacat 59
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattcataaatatttcc-caaattctgacttagaactcataaatttatatttcttaacat 503
Query: 60 ctaactctcccacttattagaaacaaaaacctatttttacctgaaggttattggcattag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctaactctcccacttattagaaacaaaaacctatttttacctgaaggttattggcattag 443
Query: 120 gaatatcttcatgcttttcatccaaaagctttgacatcatcaccagactgaggcactgcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaatatcttcatgcttttcatccaaaagctttgacatcatcaccagactgaggcactgcc 383
Query: 180 tcagctgcctggaattaaaaatgaaaagcatttataatgtgtttaaacaatactgcttga 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcagctgcctggaattaaaaataaaaagcatttataatgtgtttaaacaatactgcttga 323
Query: 240 caggcaagcaaatgtgcccaaagaagtctcagtctctctcccagggctgtagaagaaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caggcaagcaaatgtgcccaaagaagtctcagtctctctcccagggctgtagaagaaaca 263
Query: 300 actgttacagagccacaagttattcatgtaaaaaaaccacacacataaagttagaactgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actgttacagagccacaagttattcatgtaaaaaaaccacacacataaagttagaactgc 203
Query: 360 tgggggctggagagatggctcatcagttaagagcactgactgtttgttcttccagaggtc 419
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 202 tgggggctggagagatggctcagcagttaagagcactgactgtt----cttccagaggtc 147
Query: 420 ctgagttcaaatcccaa 436
|||||||||||||||||
Sbjct: 146 ctgagttcaaatcccaa 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_h17.g1 MSMg01no468_h17.g1 CHROMAT_FILE:
MSMg01no468_h17.g1 PHD_FILE: MSMg01no468_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:43 2005
(334 letters)
>mm_chr19_44875967_44876700
Length = 734
Score = 623 bits (322), Expect = 0.0
Identities = 331/334 (99%)
Strand = Plus / Plus
Query: 1 ggagataaatgactaacaaggaggaggtcgtgagagatctcagagggacttaagagtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagataaatgactaacaaggaggaggtcgtgagagatctcagagggacttaagagtatc 260
Query: 61 agcctttccagacctgtgtgtgcacagcacagggctcgggctcagggtactaggaacagc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 agcctttccagacctgtgtgtgcacagcacagggctcgggctgagggtactaggaacagc 320
Query: 121 tgagtgggccagagcccacagctttgggtttttattagcaaacattggttacagataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagtgggccagagcccacagctttgggtttttattagcaaacattggttacagataata 380
Query: 181 atgggcttcattatggcgtctaatacatgtatgtttttgttatattcaccccataatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgggcttcattatggcgtctaatacatgtatgtttttgttatattcaccccataatgtc 440
Query: 241 ttcttatttttattacttctatgaatctgctctacccaaccagtcccttttatctttttc 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttatccttattacttctatgaatctgctctacccaaccagtcccttttatctttttc 500
Query: 301 tgtaatagtggagggttttcttttgtggtgtgtg 334
||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaatagtggagggttttcttttgtggtgtgtg 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
