Query= MSMg01no469_a08.b1 MSMg01no469_a08.b1 CHROMAT_FILE:
MSMg01no469_a08.b1 PHD_FILE: MSMg01no469_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:27 2005
(481 letters)
>mm_chr19_32600156_32601036
Length = 881
Score = 915 bits (473), Expect = 0.0
Identities = 479/481 (99%)
Strand = Plus / Plus
Query: 1 tatctacgtttgacctccatctcagtcctcactcagtgacacagctgtcatctatatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatctacgtttgacctccatctcagtcctcactcagtgacacagctgtcatctatatagg 260
Query: 61 ccagacctcactgtcccactactgaaacctgttgattccataaagcaggtggcttgaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagacctcactgtcccactactgaaacctgttgattccataaagcaggtggcttgaaca 320
Query: 121 gagagatggataaaaacgtcagggctctgccaccaacttgccataagctgcctgtactgc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagatggatgaaaacgtcagggctctgccaccaacttgccataagctgcctgtactgc 380
Query: 181 ctcgtggcaatgatctccatccttcctcgtccccatgtaatggagtatgccttctgcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcgtggcaatgatctccatccttcctcgtccccatgtaatggagtatgccttctgcctg 440
Query: 241 ttgcagtagctctgttaggggcagcaatcaccataccaccaccccactgtttgacacgag 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcagtagctctgtgaggggcagcaatcaccataccaccaccccactgtttgacacgag 500
Query: 301 tagagtctggtattcctgaggtaaccctttctaaatctgtatctttgttgccctgcttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagagtctggtattcctgaggtaaccctttctaaatctgtatctttgttgccctgcttcc 560
Query: 361 ttctgggcagtcctcccatggggccactttccttttgcacccacatttcagccattttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgggcagtcctcccatggggccactttccttttgcacccacatttcagccattttac 620
Query: 421 cccctgctccttcatggcatggtcttacaccctctctcatggggaaaatcctttctcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccctgctccttcatggcatggtcttacaccctctctcatggggaaaatcctttctcctt 680
Query: 481 c 481
|
Sbjct: 681 c 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_a08.g1 MSMg01no469_a08.g1 CHROMAT_FILE:
MSMg01no469_a08.g1 PHD_FILE: MSMg01no469_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:27 2005
(170 letters)
>mm_chr19_32775493_32776062
Length = 570
Score = 228 bits (118), Expect = 1e-64
Identities = 124/126 (98%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 1 cactgtacaataattcttttatttgaaatgcttgtcgactaagaagtaagttgaaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cactgtacaataattcttttatttgaaatgcttgtcgactaagaagtaagttgaaatttg 247
Query: 61 gaaaattaggtctaaagacacttttctttagaaaaaaaaatcacaattttcttttg-ttt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 246 gaaaattaggtctaaagacacttttctttagaaaaaaaaatcacaattttcttttggttt 187
Query: 120 t-tttt 124
| ||||
Sbjct: 186 tatttt 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
