Query= MSMg01no472_e21.b1 MSMg01no472_e21.b1 CHROMAT_FILE:
MSMg01no472_e21.b1 PHD_FILE: MSMg01no472_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:53 2005
(444 letters)
>mm_chr19_4861693_4862536
Length = 844
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Minus
Query: 1 ccactttgaccgggtcggtgggggctaactcctgtgggctgacagacttgagggcgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccactttgaccgggtcggtgggggctaactcctgtgggctgacagacttgagggcgggtg 585
Query: 61 ggatttggagaccagacctgatatccatttgcccttgacagaagcggaatgggatgatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggatttggagaccagacctgatatccatttgcccttgacagaagcggaatgggatgatgg 525
Query: 121 agcccgacgacttccgagcttgtctcatctccatgggttacgatctggtgagtgccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 agcccgacgacttccgagcttgtctcatctccatgggttacgatctggtgagtgccatgg 465
Query: 181 ccacttcagaagcatcatcaggtcccctccctctgcctggccgcctcctcacacaaatta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccacttcagaagcatcgtcaggtcccctccctctgcctggccgcctcctcacacaaatta 405
Query: 241 ccttttctgctcatcacactcacgcaaaggctatctaagatactgagaggtaaattaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ccttttctgctcatcacactcacgcaaaggctatctaagatactgagaggtaaattaact 345
Query: 301 agtccagtgtgaccttagcttggaccatttttccccctctaagaaacaatgctaagttgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtccagtgtgaccttagcttggaccatttttccccctctaagaaacaatgctaagttgc 285
Query: 361 aaaatatctgaaccatgaagcaagagagggaattgccacaggcaaatggctacttctttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaaatatctgaaccatgaagcaagagagggaattgccacaggcaaatggctacttctttc 225
Query: 421 tgcctagcatgaaggactccctaa 444
||||||||||||||||||||||||
Sbjct: 224 tgcctagcatgaaggactccctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_e21.g1 MSMg01no472_e21.g1 CHROMAT_FILE:
MSMg01no472_e21.g1 PHD_FILE: MSMg01no472_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:54 2005
(239 letters)
>mm_chr19_4711195_4711833
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 1 tcctggttgataaatgagaggagctgaggagccgctgtgatgacggttccgagaatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctggttgataaatgagaggagctgaggagccgctgtgatgacggttccgagaatctga 260
Query: 61 tttgtgagaaggcgaatctccaggagcaccatggagatgcttttggaaagcgggccagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgagaaggcgaatctccaggagcaccatggagatgcttttggaaagcgggccagcc 320
Query: 121 tacctgccagaaggaggacgagagaaagggggcaaggcagagagaaacgcttaagcgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctgccagaaggaggacgagagaaagggggcaaggcagagagaaacgcttaagcgaga 380
Query: 181 tggcctggaggtgccccaaaagggacctttgaaaaggaaacggaggccgcatctcgggg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcctggaggtgccccaaaagggacctttgaaaaggaaacggaggccgcatctcgggg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
