Query= MSMg01no472_g21.b1 MSMg01no472_g21.b1 CHROMAT_FILE:
MSMg01no472_g21.b1 PHD_FILE: MSMg01no472_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:04 2005
(419 letters)
>mm_chr19_43808931_43809750
Length = 820
Score = 756 bits (391), Expect = 0.0
Identities = 413/421 (98%), Gaps = 3/421 (0%)
Strand = Plus / Plus
Query: 1 atagttcttaatattctgatagatgtggagctctagaaaatgtgcagcgtcttatgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagttcttaatattctgatagatgtggagctctagaaaatgtgcagcgtcttatgtggc 260
Query: 61 tctgtgtggcatatgcccacatagaatcccctattcaccccaagaccaggagggctgcag 120
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 261 tctgtgtggcatatgcccacatagaaccccccattcaccccaagaccaggagggctgcag 320
Query: 121 gtaaactgctattctaaactcctgattatcagagctggtctttgcaaccaacttcacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaactgctattctaaactcctgattatcagagctggtctttgcaaccaacttcacttc 380
Query: 181 aggcagtc--actgaccctgctgcaggaaaccagatctcagtgcaggttaaagacgcaaa 238
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcagtctcactgaccctgccgcaggaaaccagatctcagtgcaggttaaagacgcaaa 440
Query: 239 cctgagcctgtgagacagctcagcgggtaaaaagcaatcgccacacaaagacagaaggag 298
|||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 441 cctgagccagtgagacagctcagcgg-tacaaagcaatcgccacacaaagacagaaggag 499
Query: 299 agaaccaactcgcaggagttgtccccttttctctgcatgcacgtgcatgtacaatgcata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaaccaactcgcaggagttgtccccttttctctgcatgcacgtgcatgtacaatgcata 559
Query: 359 tcccctgtcatgtacatgcacacacaataataagtaaattcttagaaaaattaaatgatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcccctgtcatgtacatgcacacacaataataagtaaattcttagaaaaattaaatgatg 619
Query: 419 t 419
|
Sbjct: 620 t 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_g21.g1 MSMg01no472_g21.g1 CHROMAT_FILE:
MSMg01no472_g21.g1 PHD_FILE: MSMg01no472_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:04 2005
(435 letters)
>mm_chr19_44016383_44017217
Length = 835
Score = 812 bits (420), Expect = 0.0
Identities = 431/435 (99%)
Strand = Plus / Minus
Query: 1 tccatcttgtgaattattacaagagggtgctgtgtagccccaaactagacaggagtctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tccatcttgtgaattattacaagagggtgctgtgtagccccaaactagacaggagtctca 407
Query: 61 gggcagtagaccattcctctgctagcctgcctcagaagaatggtattatgggaatcaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 406 gggcagtagaccattcctctgctagcctgcctcagaagaatggtattatggaaatcaacc 347
Query: 121 attcatgatttagaatctccatgatgccctcaggcaatcactgtcaaacttcagtgcacc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 346 attcatgatttagaatctccatgatgccctcaggcaatcactctcaaacttcagtgcacc 287
Query: 181 caccaaagagcatacctctgagagtcagtgacctggccattccggaactgacccttacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 caccaaagagcatacctctgagagtcagtgacctggccattccggaactgacccttacgt 227
Query: 241 gaaaggaaaatgcttcaattaggcgtggagaaatggctcagagagaaagacacatgccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gaaaggaaaatgcttcaattaggcgtggagaaatggctcagagagaaagacacatgccgt 167
Query: 301 caaacctggaggccacatggtagaagagaactgattcccagaagttgtcctctgacctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 caaacctggaggccacatggtagaagagaactgattcccagaagttgtcctctgacctcc 107
Query: 361 tcatgagacccctgcctcaagtgccccataccccagtaactaagtaagtaagtanataga 420
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 106 tcatgagacccctgcctcaagtgccccgtaccccagtaactaagtaagtaagtaaataga 47
Query: 421 taaaaaaataaataa 435
|||||||||||||||
Sbjct: 46 taaaaaaataaataa 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
