Query= MSMg01no473_h07.b1 MSMg01no473_h07.b1 CHROMAT_FILE:
MSMg01no473_h07.b1 PHD_FILE: MSMg01no473_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:32 2005
(251 letters)
>mm_chr19_3531151_3531801
Length = 651
Score = 485 bits (251), Expect = e-142
Identities = 251/251 (100%)
Strand = Plus / Minus
Query: 1 cctacctgtgtatgcagctgaatgccatcctctgcctgggttttgtgggccatagatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctacctgtgtatgcagctgaatgccatcctctgcctgggttttgtgggccatagatgat 263
Query: 61 ctctgtcacacacactccgttctccaattccatccttccctcaaacccgacactatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctctgtcacacacactccgttctccaattccatccttccctcaaacccgacactatgaaa 203
Query: 121 aaatgtcaaaacctgccgggcgtggtggtggcacacgcctttaatcccagcactcgggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaatgtcaaaacctgccgggcgtggtggtggcacacgcctttaatcccagcactcgggag 143
Query: 181 gcagaggcaggcggatttctgaggtcaaggccagcctggtctacagagtgagttccagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gcagaggcaggcggatttctgaggtcaaggccagcctggtctacagagtgagttccagga 83
Query: 241 cagccagggct 251
|||||||||||
Sbjct: 82 cagccagggct 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no473_h07.g1 MSMg01no473_h07.g1 CHROMAT_FILE:
MSMg01no473_h07.g1 PHD_FILE: MSMg01no473_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:32 2005
(580 letters)
>mm_chr19_3363974_3364953
Length = 980
Score = 1044 bits (540), Expect = 0.0
Identities = 570/580 (98%)
Strand = Plus / Plus
Query: 1 tcctggtccccctgcccatgtgtgcactgctatatagttctatgcctagttttatgcatt 60
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tcctgatcctcctgcccatgtgtgcactgctatatagttctatgcctagttttatacatt 260
Query: 61 ccaacagttgagctaaaacccagcccgactctttttatttatttatttaaacgcaatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaacagttgagctaaaacccagcccgactctttttatttatttatttaaacgcaatatg 320
Query: 121 aaactatgctctatagtctagccaggtctccctttaagaccagtgtgtctctcaattcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactatgctctatagtctagccaggtctccctttaagaccagtgtgtctctcaattcct 380
Query: 181 tatggcctgtctgcttgagacagctttgttttggagcctgtcatacactggaattttcca 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatggcctgtctgcttgagacaactttgttttggagcctgtcatacactggaattttcca 440
Query: 241 gaaagatttgtttttatctgggcatgactgctcagcatgctgacttgtcgtgcttgtacc 300
|||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 441 gaaagatttgcatacatctgggcatgactgctcagcgtgctgacttgtcgtgtttgtacc 500
Query: 301 ataggtgagtgactggtgggaggaatacatctacctgcggggccgagggccgatcatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataggtgagtgactggtgggaggaatacatctacctgcggggccgagggccgatcatggt 560
Query: 361 taacagcaactactacgccatggtgagttggtcttccattcccactgcagccaagatggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacagcaactactacgccatggtgagttggtcttccattcccactgcagccaagatggg 620
Query: 421 tttgtcctgctgggtggcctgggaaagctcctcttgctcctgcttcttttgtccaagtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgtcctgctgggtggcctgggaaagctcctcttgctcctgcttcttttgtccaagtct 680
Query: 481 tcatgttgctgtgaagagcccacctggggcccatgtgttagacccccctgtgtcttaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatgttgctgtgaagagcccacctggggcccatgtgttagacccccctgtgtcttaacg 740
Query: 541 ggcccctgccctccacccaacagtgcaaatacattttcat 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggcccctgccctccacccaacagtgcaaatacattttcat 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
