Query= MSMg01no476_c14.b1 MSMg01no476_c14.b1 CHROMAT_FILE:
MSMg01no476_c14.b1 PHD_FILE: MSMg01no476_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:11 2005
(241 letters)
>mm_chr19_42162182_42162822
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 cttggatctttccttgcccataatattaaatccattagctaaatgagatgaatgatatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggatctttccttgcccataatattaaatccattagctaaatgagatgaatgatatca 260
Query: 61 aataccatttccatggttctgagaacccattatatcactacatgagttaggtagacatcg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatactatttccatggttctgagaacccattatatcactacatgagttaggtagacatcg 320
Query: 121 ctacatagctactttacctataaaaggccattgaactctatatagatctttggccagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ctacatagctactttacctataaaaggccattgaactctatatagatctttggccaggat 380
Query: 181 ggtgtatttattttttgttgtgttggaggtgaacacagggtcttctatatggtaagcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgtatttattttttgttgtgttggaggtgaacacagggtcttctatatggtaagcaaa 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_c14.g1 MSMg01no476_c14.g1 CHROMAT_FILE:
MSMg01no476_c14.g1 PHD_FILE: MSMg01no476_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:11 2005
(242 letters)
>mm_chr19_42342969_42343610
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 238/251 (94%), Gaps = 11/251 (4%)
Strand = Plus / Minus
Query: 1 aattctccaggccctccttagagtgaggaaggaggcaggaaagatagggtttgtccaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aattctccaggccctccttagagtgaggaaggaggcaggaaagatagggtttgtccaagc 283
Query: 61 tgggtcccccacccccaccccagacatcctaggaaggtctgggtctgatgactcagatca 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 282 tgggtcccccacccccaccccagacatcctaggacggtctgggtctgatgactcagatca 223
Query: 121 gcctcatgggag-----------aaaaaaaaaaggtccagggtcagaaagaagaagatcc 169
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 222 gcctcatgggagaaaaaaaaaaaaaaaaaaaaaggtccagggtcagaaagaagaagatcc 163
Query: 170 tgccaaggagcaaaggtctggggacagggaacagcgggcaggcaccctccctttcgcacc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 162 tgccaaggagcaaaggtctggggacagggaacagcgggcaggcaccctcccttccgcacc 103
Query: 230 acatggcaggg 240
|||||||||||
Sbjct: 102 acatggcaggg 92
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
