XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
AAGAGAATTTCCCAAGGATTATATTTGGCTTGGGGTTCATCACTTCCATG
TACATGTCAGTGCCATCAATTCACTCACTGACTACCATGTAATGCTGGCA
TTTGTTTCATCAGGAGCACTGGTAATAAACCTGGGTTATGACATGCAAAT
AACTACCCATAATACACTTGGTGTCTTAAGCTTCTGTAGGTCTTCCTGTC
TGCTATGTCTTGAATGCACTATGAATGAACTACTTTGCAAATGTAGCTAT
GGACAATCTTTGAAGTACAAGGATTGTAATATCCTGAAGTAGCATATTAC
TCTATATATGATATGACTCAACAAAACAAAACAAAACAAAACAAAACACA
ACCCTCTGAGTTAGTAATCTGATGCTTACAATTACTTCTTTATGTGTAGA
GTTCTTAAAGCAGCCCAAATCCTTAAAAGAGAATAATTGGTTAAATATGG
CAATAACTTAGTGTCCCATAATTAATAATTATGAATAGATCTCCTGGCAT
ATCATGGCAATCCATACAGGGAGCATTTGGTGATACAAGAGTTGGGATCT
GCCCTGCTGCCTTCTGTTGGCTTTGCTAAAGGATCCTATTGTCTAGAAAA
TCTTAGTTGTATCAGTCTGTTTCCCATCATTATAACCATCTGAGCCATTG
ATTTATACAGAGAAAGGGCTACTTGGCTTATAGTTCTAGAGGCGTTCATA
GCTTTTGGCATTGCTAAGG

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACCCAATGGCAGAGAAGCAC
CTGAAATAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC
CATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTG
GCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACA
TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
AGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACA
TCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA
TTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATT
AGCCCCAAACCTAGGATTCCCAAGATATAAGGTACAATTTGCTAAACACA
TGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTT
AGAATTGGGAACAAAAN

Query= MSMg01no481_l02.b1 MSMg01no481_l02.b1 CHROMAT_FILE:
MSMg01no481_l02.b1 PHD_FILE: MSMg01no481_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:25 2005
         (660 letters)



>mm_chr19_32081782_32082840
          Length = 1059

 Score =  864 bits (447), Expect = 0.0
 Identities = 509/543 (93%), Gaps = 23/543 (4%)
 Strand = Plus / Minus

                                                                        
Query: 118  ctgggttatgacatgcaaataactacccataatacacttggtgtcttaagcttctgtagg 177
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1059 ctgggttatgacatgcaaataactacccataatacatttggtgtcttaagcttctgtagg 1000

                                                                        
Query: 178  tcttcctgtctgctatgtcttgaatgcactatgaatgaactactttgcaaatgtagctat 237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  tcttcctgtctgctatgtcttgaatgcactatgaatgaactactttgcaaatgtagctat 940

                                                                        
Query: 238  ggacaatctttgaagtacaaggattgtaatatcctgaagtagcatattactctatatatg 297
            |||||||| |||||||||||            ||||||||||||||||||||||||||||
Sbjct: 939  ggacaatccttgaagtacaa------------cctgaagtagcatattactctatatatg 892

                                                                        
Query: 298  atatgactcaacaaaacaaaacaaaacaaaacaaaacacaaccctctgagttagtaatct 357
            |||||||||          ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 891  atatgactc----------aacaaaacaaaacaaaatacaaccctctgagttagtaatct 842

                                                                        
Query: 358  gatgcttacaattacttctttatgtgtagagttcttaaagcagcccaaatccttaaaaga 417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  gatgcttacaattacttctttatgtgtagagttcttaaagcagcccaaatccttaaaaga 782

                                                                        
Query: 418  gaataattggttaaatatggcaataacttagtgtcccataattaataattatgaatagat 477
            ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 781  gaataattggttaaatatggcaataacctagtgtcccataattaataactatgaatagat 722

                                                                        
Query: 478  ctcctggcatatcatggcaatccatacagggagcatttggtgatacaagagttgggatct 537
            | |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 721  cgcctggcatatcatggcaatccataca-ggagcatttggtgatacaagagttggaatct 663

                                                                        
Query: 538  gccctgctgccttctgttggctttgctaaaggatcctattgtctagaaaatcttagttgt 597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  gccctgctgccttctgttggctttgctaaaggatcctattgtctagaaaatcttagttgt 603

                                                                        
Query: 598  atcagtctgtttcccatcattataaccatctgagccattgatttatacagagaaagggct 657
            |||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||
Sbjct: 602  atcagtctgtttcccatcattataattatctgagacatcgatttatacagagaaagggct 543

               
Query: 658  act 660
            |||
Sbjct: 542  act 540


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space:   681850
Effective search space used:   681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)