XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCTT
TTTGGTTTCCGCTAAATCTCTGATTGATGGAAATGTTCTCCAAATATAAT
GAAGTCCCTCAACTATTTCTCATTTGGATAAAATGAATAATACTTTGTTG
AACATGTAATAAATGTGATTCTTGCTGAAACTGAGAAAGAATAATTAACT
TTCCTCTATACAAAGTACTTCTTTTTCAAAATTGCAAAAATATGGTCTCC
TGACTTATGTAGAGAAATTGAAACCAGGGAGTTCTAAATCTCATAATTAT
GTTGCTATCCATCATGATCTATAAATAACAATTTATCTGGTTTTCTTTTC
TACATTTTTCAGAGAAAAACATTTATAAACAATGTTAAGCCTTTCAAGAA
TACAATTAACAACCAACACTATAATATCTGCAAGAACTGACATCTGAGGA
AAGAAATGTTCTGTAATATAGGGTATTCCTTATACCAAGAAGCACCTTTT
ACTTATTGTTCATGTCTAATACTTTTAAATTCTTCAGGTCTAATGGGGAA
AGACAACAGAAGAGGGAAGTTTAAGGAGTATTTGTGTATGTTTATATTTT
GCCTTTAGTATCTTACACAGCCCTATGAGGTAGGAATGTATAGATAAGAG
TTGAGGTAAATTGTCTAAGCCATACATCCAGTGATGTACAGAAACAAGAT
AAGGCATACAAAGTTAACAATCGACACAATGGACATGCTGGACCCTGAGT
TTC

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTTTCACATTGTCTGCTAGTATGGGTGGATCCA
GGCCTGCCTTTGTCTACTATCATGTATGCTTGTATGCAAACACCGCTGAC
ATGAACAGTGCCTCTATATGCTGGTGCTGAAATAGCTCAAGGAAGAATCA
TGTAATACTATTACTACAGTTTAATGCATCTAATGTCACAGGCAAACTCA
GACACCTGGAGACCATCAAACTCAAATTAAAAACTCATTGGAAGGAACAG
ACAGTCTTTTCACATATTGCCTATAAATCTTCAACAACCCACTCTCCTTG
GGCGTAACATCAAATGTTCGCCTTCTTTTTGGTGTCTCATTAGGGAGGAA
ATTTATTGCCCAACTCTTGAACTATGTCATATTTTAAAGAAAGTTCTATG
AATATTTCCAGGAGCCACATTCTTGACTTTGTATCAGCTTTATGCCACAA
AAAAAGCATGGTCTTCTCAATGAAATGACACTAATCACTAAATTAAAGGT
GTTAGCATGTACTCAGTTGGAAGTGACAGCAATTCTCCAGAAATGTATGC
TAGTTCTGACTTCCTTTGATAAGTTAGAATGACATCACCCCCTTCATTCC
AGAGCACAACGCACTTCCTGTGCACTCTCTTGCCCCTGAGGTCACCTTTC
CCTGTCTTAAATTGAGCCCAAAGAGAATCCTTCAGAAGAACCCCATCCTT
ATGCT

Query= MSMg01no481_m10.b1 MSMg01no481_m10.b1 CHROMAT_FILE:
MSMg01no481_m10.b1 PHD_FILE: MSMg01no481_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:31 2005
         (709 letters)



>mm_chr19_60305163_60306271
          Length = 1109

 Score = 1309 bits (677), Expect = 0.0
 Identities = 701/709 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaattctttttggtttccgctaaatctctgattgatggaaatgttctccaaatataatga 60
           ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctttttggtagctgctaaatctctgattgatggaaatgttctccaaatataatga 260

                                                                       
Query: 61  agtccctcaactatttctcatttggataaaatgaataatactttgttgaacatgtaataa 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 agtccctcaactatttctcatttggataaaatgaatactactttgttgaacatgtaataa 320

                                                                       
Query: 121 atgtgattcttgctgaaactgagaaagaataattaactttcctctatacaaagtacttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgattcttgctgaaactgagaaagaataattaactttcctctatacaaagtacttct 380

                                                                       
Query: 181 ttttcaaaattgcaaaaatatggtctcctgacttatgtagagaaattgaaaccagggagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcaaaattgcaaaaatatggtctcctgacttatgtagagaaattgaaaccagggagt 440

                                                                       
Query: 241 tctaaatctcataattatgttgctatccatcatgatctataaataacaatttatctggtt 300
           ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 441 tctaaatctcataattatgttgctatccatcatgatcgagaaataacaatttatctggtt 500

                                                                       
Query: 301 ttcttttctacatttttcagagaaaaacatttataaacaatgttaagcctttcaagaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcttttctacatttttcagagaaaaacatttataaacaatgttaagcctttcaagaata 560

                                                                       
Query: 361 caattaacaaccaacactataatatctgcaagaactgacatctgaggaaagaaatgttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caattaacaaccaacactataatatctgcaagaactgacatctgaggaaagaaatgttct 620

                                                                       
Query: 421 gtaatatagggtattccttataccaagaagcaccttttacttattgttcatgtctaatac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaatatagggtattccttataccaagaagcaccttttacttattgttcatgtctaatac 680

                                                                       
Query: 481 ttttaaattcttcaggtctaatggggaaagacaacagaagagggaagtttaaggagtatt 540
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 tttcaaattcttcaggtctaatggggaaagacaacagaagagggaagtttaaggagtact 740

                                                                       
Query: 541 tgtgtatgtttatattttgcctttagtatcttacacagccctatgaggtaggaatgtata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtatgtttatattttgcctttagtatcttacacagccctatgaggtaggaatgtata 800

                                                                       
Query: 601 gataagagttgaggtaaattgtctaagccatacatccagtgatgtacagaaacaagataa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gataagagttgaggtaaattgtctaagccatacatccagtgatgtacagaaacaagataa 860

                                                            
Query: 661 ggcatacaaagttaacaatcgacacaatggacatgctggaccctgagtt 709
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ggcatacaaagttaacaatcgacacaatggacatgctggaccctgagtt 909


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space:   768201
Effective search space used:   768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)

Query= MSMg01no481_m10.g1 MSMg01no481_m10.g1 CHROMAT_FILE:
MSMg01no481_m10.g1 PHD_FILE: MSMg01no481_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:32 2005
         (636 letters)



>mm_chr19_60488752_60489787
          Length = 1036

 Score = 1214 bits (628), Expect = 0.0
 Identities = 634/636 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttttcacattgtctgctagtatgggtggatccaggcctgcctttgtctactatcatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 tttttcacattgtctgctagtatgggtggatccaggcctgcctttgtctactatcatgta 777

                                                                       
Query: 61  tgcttgtatgcaaacaccgctgacatgaacagtgcctctatatgctggtgctgaaatagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgcttgtatgcaaacaccgctgacatgaacagtgcctctatatgctggtgctgaaatagc 717

                                                                       
Query: 121 tcaaggaagaatcatgtaatactattactacagtttaatgcatctaatgtcacaggcaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tcaaggaagaatcatgtaatactattactacagtttaatgcatctaatgtcacaggcaaa 657

                                                                       
Query: 181 ctcagacacctggagaccatcaaactcaaattaaaaactcattggaaggaacagacagtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctcagacacctggagaccatcaaactcaaattaaaaactcattggaaggaacagacagtc 597

                                                                       
Query: 241 ttttcacatattgcctataaatcttcaacaacccactctccttgggcgtaacatcaaatg 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttttcacagattgcctataaatcttcaacaacccactctccttgggcgtaacatcaaatg 537

                                                                       
Query: 301 ttcgccttctttttggtgtctcattagggaggaaatttattgcccaactcttgaactatg 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttcgacttctttttggtgtctcattagggaggaaatttattgcccaactcttgaactatg 477

                                                                       
Query: 361 tcatattttaaagaaagttctatgaatatttccaggagccacattcttgactttgtatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcatattttaaagaaagttctatgaatatttccaggagccacattcttgactttgtatca 417

                                                                       
Query: 421 gctttatgccacaaaaaaagcatggtcttctcaatgaaatgacactaatcactaaattaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gctttatgccacaaaaaaagcatggtcttctcaatgaaatgacactaatcactaaattaa 357

                                                                       
Query: 481 aggtgttagcatgtactcagttggaagtgacagcaattctccagaaatgtatgctagttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aggtgttagcatgtactcagttggaagtgacagcaattctccagaaatgtatgctagttc 297

                                                                       
Query: 541 tgacttcctttgataagttagaatgacatcacccccttcattccagagcacaacgcactt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgacttcctttgataagttagaatgacatcacccccttcattccagagcacaacgcactt 237

                                               
Query: 601 cctgtgcactctcttgcccctgaggtcacctttccc 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 cctgtgcactctcttgcccctgaggtcacctttccc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)