CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCACTTCCAACAAGCAGCCCTAGGCCTAGTGCCGAATCTAGGTT
TATGCAGCATTTATACCAAGCCTTTAGCTTTTATGAAAGGCAATATAAAA
ATCAATTCATTTGTACTGAAACTTCAGAGACTTGCTCAATGGGTTCTGTT
AGCATGATCGACTGCTAGTGTTTTGTTGTAATGTTTCACTCTGTATTTAA
TTATCATCTTTTGTGGATTTCATCTTTTAGTACACAGAGCCTCCCTACAC
AATGTACAGGATGTAGAACTATACATATTTTTCTAACTAGACCTTTGCTT
TATTTGTGTGTGCTCATTTTTTCTTAGAATGGTCCTCACATCTGTACACA
ATGATTAGGGGCTGTGGGGGGAGGAACAAACAAGAAAGTAAAAATGGATG
AAATTTAATGTATAAACTTATTGGCCTTAAAGTCCAGAGTGAAACTTTAT
TCGTTACGTTGGTAGGATAAAAGTATCATGTCACATATAAAGAACTGTTA
CTGAGAAAGAAATATTAGACGTCTTTGACAATACAAGAGTAAAAAAAAAA
ATGCATGGGTAGAGATCAGCCAGATAAGGGTTAAAATCAGGAATGTAGGG
TGCAAACTACATCAATGAAGTAGTACTACATCTGTTAGTAGTACTACATC
TTGGTACTACATCTGTTTAGTCATCATGAGTAAAACAGATATGAAAAT

CGAATGAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATGCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCCAAATCTAGGATACCCAAGATATAAGATATAATTTG
CTAAACACATGAN

Query= MSMg01no482_n02.b1 MSMg01no482_n02.b1 CHROMAT_FILE:
MSMg01no482_n02.b1 PHD_FILE: MSMg01no482_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:48 2005
         (642 letters)



>mm_chr19_30589823_30590863
          Length = 1041

 Score = 1120 bits (579), Expect = 0.0
 Identities = 627/643 (97%), Gaps = 3/643 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagccctaggcctagtgccgaatctaggtttatgcagcatttataccaagcctttagctt 60
           |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cagccctaggcctagtgctgaatctaggtttatgcagcatttacaccaagcctttagctt 260

                                                                       
Query: 61  ttatgaaaggcaatataaaaatcaattcatttgtactgaaacttcagagacttgctcaat 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatgaaaggcaatgtaaaaatcaattcatttgtactgaaacttcagagacttgctcaat 320

                                                                       
Query: 121 gggttctgttagcatgatcgactgctagtgttttgttgtaatgtttcactctgtatttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggttctgttagcatgatcgactgctagtgttttgttgtaatgtttcactctgtatttaa 380

                                                                       
Query: 181 ttatcatcttttgtggatttcatcttttagtacacagagcctccctacacaatgtacagg 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ttatcatcttttgtggatttcatcttttagtacacagagcctccttacacaatgtacagg 440

                                                                       
Query: 241 atgtagaactatacatatttttctaactagacctttgctttatttgtgtgtgctcatttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtagaactatacatatttttctaactagacctttgctttatttgtgtgtgctcatttt 500

                                                                       
Query: 301 ttcttagaatggtcctcacatctgtacacaatgattaggggctgtggggggaggaacaaa 360
           ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 501 ttcttagaatggtcctcacatctgtacacaatgtttaggggctgtggagggaggaacaaa 560

                                                                       
Query: 361 caagaaagtaaaaatggatgaaatttaatgtataaacttattggccttaaagtccagagt 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 caagaaagtaaaaatggatgaaatttaatgtataaactaattggccttaaagtccagagt 620

                                                                       
Query: 421 gaaa-ctttattcgttacgttggtaggataaaagtatcatgtcacatataaagaactgtt 479
           |||| ||||||| ||||||||| ||| ||||| ||||||| |||||||||||||||||||
Sbjct: 621 gaaaactttatttgttacgttg-tagaataaacgtatcatctcacatataaagaactgtt 679

                                                                       
Query: 480 actgagaaagaaatattagacgtctttgacaatacaagagtaaaaaaaaaaatgcatggg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 680 actgagaaagaaatattagacgtctttgacaatacaagagtaaaaaaaaaa-tgcatggg 738

                                                                       
Query: 540 tagagatcagccagataagggttaaaatcaggaatgtagggtgcaaactacatcaatgaa 599
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 739 tagagatcagccagataagggttaaaatcaggaatgtaggatgcaaactacatcaacgaa 798

                                                      
Query: 600 gtagtactacatctgttagtagtactacatcttggtactacat 642
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtagtactacatctgttagtagtactacatcttggtactacat 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space:   651592
Effective search space used:   651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)