Query= MSMg01no486_b09.b1 MSMg01no486_b09.b1 CHROMAT_FILE:
MSMg01no486_b09.b1 PHD_FILE: MSMg01no486_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:17 2005
(627 letters)
>mm_chr19_54605928_54606954
Length = 1027
Score = 1000 bits (517), Expect = 0.0
Identities = 551/567 (97%), Gaps = 8/567 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagtgatcagtgtggagagggaagaagggaataggtggcagcatgatgatgtct 63
|||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggaatttagtgagcagagtggagagggaagaagggaataggtggcagcatgatgatgtct 500
Query: 64 gagtggcagggaggcattaggtatcagaagaactttagaacgttaaaagcctatgaagca 123
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 499 gagtggcagggaggcattaggtatcaga--------agaacgttaaaagcctatgaagca 448
Query: 124 ggataggcaggaggaaagaggctgaagataggaagaccagtgatgccattgatgtggggc 183
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggataggcaggagaaaagagactgaagataggaagaccagtgatgccattgatgtggggc 388
Query: 184 cttgtgtgccaccttaaggaagctaaaagtattcaagtgcaaagcagatatagttgaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttgtgtgccaccttaaggaagctaaaagtattcaagtgcaaagcagatatagttgaaaa 328
Query: 244 ttacatgtttacatatttattttgtaatatgtgttttgatcaaatttacctctttccttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 327 ttacatgtttacatatttattttgtaatatgtgttttgatcaaatttacctctttccctc 268
Query: 304 ccgactcctcttagatccacgcctagtttcctactaacccgtgtttgtcatcatttaaaa 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccgactcctcttagatccacacctagtttcctactaacccgtgtttgtcatcatttaaaa 208
Query: 364 atctcagtccaatttgtgcatcccatatgatcttgggtgagtagccttccatgggagcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atctcagtccaatttgtgcatcccatatgatcttgggtgagtagccttccatgggagcat 148
Query: 424 ggtcagtctatgaagggatatacttaaggaaaacagagtctctctttcctactagctatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggtcagtctatgaagggatatacttaaggaaaacagagtctctctttcctactagctatc 88
Query: 484 aattcccaatagattcttagttagggatgggactttgtgtcatcttccctctttatccta 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 87 aattcccaatagattcttagttagggatgggactttgtgtcatcttccctttttatccta 28
Query: 544 gaattttgtctggcttaagtttgtgca 570
|||||||||||||||||||||||||||
Sbjct: 27 gaattttgtctggcttaagtttgtgca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_b09.g1 MSMg01no486_b09.g1 CHROMAT_FILE:
MSMg01no486_b09.g1 PHD_FILE: MSMg01no486_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:17 2005
(229 letters)
>mm_chr19_54470214_54470842
Length = 629
Score = 418 bits (216), Expect = e-121
Identities = 225/228 (98%)
Strand = Plus / Plus
Query: 2 gtggcaatgcctggaaggctgtcagtttggcctcagtgaggcttaatctgacttagagag 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 202 gtggcaatgcctggaaggctgtcagtttggcctcagtgagacttaatctgacttagagag 261
Query: 62 ggaagaggagatgcacagggagagcaggagggaaggaagggcagaaattcaaatgagaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggaagaggagatgcacagggagagcaggagggaaggaagggcagaaattcaaatgagaat 321
Query: 122 cttccccagagctcaaggcctttggggtttgttcatttccataaggatttattaagtacc 181
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttccccagagcccaaggcctttggggtttgttcatttccataaggatttattaagtacc 381
Query: 182 tgtcgaattcttattactgtggtgggatgggagggtggagtggggagc 229
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtcaaattcttattactgtggtgggatgggagggtggagtggggagc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
