Query= MSMg01no490_h21.b1 MSMg01no490_h21.b1 CHROMAT_FILE:
MSMg01no490_h21.b1 PHD_FILE: MSMg01no490_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:06 2005
(575 letters)
>mm_chr19_51627776_51628752
Length = 977
Score = 835 bits (432), Expect = 0.0
Identities = 529/570 (92%), Gaps = 21/570 (3%)
Strand = Plus / Plus
Query: 9 tcagaaatccccctgcctctgcctcccaagtgctaggattaaaggcatgtgccaccactg 68
||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 209 tcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcgtgtgccaccactg 268
Query: 69 cccagcctgtgtttaacttttattggaagctcggttttatttgagcaagaatggccaacc 128
|||||||||||||| ||| ||| | ||||||| |||||||||||||||||||||||||||
Sbjct: 269 cccagcctgtgtttcactcttaatagaagctcagttttatttgagcaagaatggccaacc 328
Query: 129 -cagaacaatgaaaaaatatatctagtcactttctcttatggataaaaacagccactgga 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcagaacaatgaaaaaatatatctagtcactttctcttatggataaaaacagccactgga 388
Query: 188 tattgttagaacc-aaattttatacctcgtaatcagctgtgttttccagatatgtcttta 246
||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 389 tattgttagaaccaaaattttatatctcataatcagctgtgttttccagatatgtcttta 448
Query: 247 tatttttggtgatagtaagttcccatttgctttgagctttcttttttccttttgcctagg 306
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 449 tatttttggtgatagtaagttcccatttgctttgagctttctttcttccttttgtctagg 508
Query: 307 atgtgatcataagcaaggaaaaaataatcaat-t-tttctaggttgaaaataaaacttac 364
||||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 509 atgtgatcataagcaaggaaaaaataatc--tgtctttctaggttgaaaataa------- 559
Query: 365 ttccttaccatggtgtttaactaaagaaatgcaaggagaagttgtttgatgcctagagca 424
|||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 560 ------accatgctgtttaactaaagacatgcaaggagaagttgtttgatgcctagaaca 613
Query: 425 tgcaaaccagactgcggttaattttaggaacctaactatatgagtagagaaattttcttc 484
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 614 tgcaaaccagactgcagttaattttaggaaccaaactatatgagtagagaaattttcttc 673
Query: 485 actcattattattgattgtattacacatagccatatataaaacgttagaaaataatgcgt 544
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 674 actcattattattgattgtattacacatagccatatataaaatgttagaaaataatgcat 733
Query: 545 gtctca-tcaaagaaatctgcatatttctt 573
|||| | |||||||||||||||||||||||
Sbjct: 734 gtct-agtcaaagaaatctgcatatttctt 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 977
Length adjustment: 10
Effective length of query: 565
Effective length of database: 967
Effective search space: 546355
Effective search space used: 546355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_h21.g1 MSMg01no490_h21.g1 CHROMAT_FILE:
MSMg01no490_h21.g1 PHD_FILE: MSMg01no490_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:06 2005
(525 letters)
>mm_chr19_51686581_51687505
Length = 925
Score = 826 bits (427), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Minus
Query: 92 ctatgattgactctctttctgaagaacctggaaggcattcttttgaaatataatcatgaa 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ctatgattgactctctttctgaagaacctggaaggcattcttttgaaatataatcatgaa 866
Query: 152 gggaaaagagcctctcttttcccaatctctaaggagcagaggagcccaggttgatatatg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gggaaaagagcctctcttttcccaatctctaaggagcagaggagcccaggttgatatatg 806
Query: 212 tcaattagtcaacagagatgacctaattactttgaccaacctcccttttcaagtccacag 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaattagtcaacagagatgacctaattactttgaccaacctcccttttcaagtccacag 746
Query: 272 atatttttccactggttcacttacttccttagctgtgtcccatataaatacataattaaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atatttttccactggttcacttacttccttagctgtgtcccatataaatacataattaaa 686
Query: 332 atggttataaataaaagaataaagaaacccttcccagccttttatgagttgagttgaata 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atggttataaataaaagaataaagaaacccttcccagccttttatgagttgagttgaata 626
Query: 392 aaaagtctctttcttcctatgacagtattgaataaggtctttcttgggcattaactggcc 451
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaagtctcttccttcctatgacagtattgaataaggtctttcttgggcattaactggcc 566
Query: 452 aggcacaattttacttttagaacagtacttgacctccatggccagaagtctcanataaga 511
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 aggcacaattttacttttagaacagtacttgacctccatggccagaagtctcaaataaga 506
Query: 512 gaaaagaatatagc 525
||||||||||||||
Sbjct: 505 gaaaagaatatagc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
