Query= MSMg01no491_h24.b1 MSMg01no491_h24.b1 CHROMAT_FILE:
MSMg01no491_h24.b1 PHD_FILE: MSMg01no491_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:26 2005
(568 letters)
>mm_chr19_35171379_35172347
Length = 969
Score = 1007 bits (521), Expect = 0.0
Identities = 557/569 (97%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 1 aggtctgatcaaaacttgtaggggctggccaggaaacggcatctacttattctttttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtctgatcaaaacttgtaggggctggccaggaaacggcatctacttattctttttcta 260
Query: 61 agaataatttaattcaaactaatttcaaacctgcagaaacatcttcagctggtgttgtgc 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 agaataatttaattcaaactaatttcaaacctgcagaaacatcctcagctggtgttgtgc 320
Query: 121 ctgtgcgagagccccaaaggaccaccaaggagcagatttaaatgcaatcgcagtggggtc 180
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ctgttcgagagccccaaaggaccaccaaggagcagattcaaatgcaatcgcagtggggtc 380
Query: 181 tttttattcaagctagggcttggactcatcacggactctgacccagcaggataaagagtt 240
||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||| ||||
Sbjct: 381 tttttattcaagctagggcttagactcatcgcggacactgaaccagcaggataaatagtt 440
Query: 241 cggaaagcccggagcccagtttcaagcaagcatttatagaggtaagcaaacaagtaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggaaagcccggagcccagtttcaagcaagcatttatagaggtaagcaaacaagtaaggg 500
Query: 301 gtttttt-agcctgacacatgtgtgattgtggcggtgggggtgggcgtaacttaacaaca 359
||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 gtttttttagcctggcacatgtgtgattgcggcggtgggggtgggcgtaacttaacaaca 560
Query: 360 aaattatggaattttgttgccctttaaaatagttaattggtactaggagccaaaccataa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaattatggaattttgttgccctttaaaatagttaattggtactaggagccaaaccataa 620
Query: 420 acttaacttctgctttcctcctgaatggtggttgttaggaagtgaaatgccaggggcagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttaacttctgctttcctcctgaatggtggttgttaggaagtgaaatgccaggggcagg 680
Query: 480 cttctaatctgagtcgcaggtttgttggtgagtaacctagagactggggcttgacacagg 539
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttctaatctgagtcgtaggtttgttggtgagtaacctagagactggggcttgacacagg 740
Query: 540 tttgttgggtagtaacttgagtttaacct 568
|||||||||||||||||||||||||||||
Sbjct: 741 tttgttgggtagtaacttgagtttaacct 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space: 535122
Effective search space used: 535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_h24.g1 MSMg01no491_h24.g1 CHROMAT_FILE:
MSMg01no491_h24.g1 PHD_FILE: MSMg01no491_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:26 2005
(246 letters)
>mm_chr19_35343399_35344044
Length = 646
Score = 433 bits (224), Expect = e-126
Identities = 242/248 (97%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 1 tgagttactgggaaaggaaatgagacacagatctagctcttttgcagattgttttattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgagttactgggaaaggaaatgagacacagatctagctcttttgcagattgttttattgc 387
Query: 61 tgctttatggaaagcataatcttccactggcaatgaaagctgcagtagaaacctctcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgctttatggaaagcataatcttccactggcaatgaaagctgcagtagaaacctctcggg 327
Query: 121 gtaaactaaataggagagctcagaaactggccggtggcaccactacactgaaaattctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtaaactaaataggagagctcagaaactggccggtggcaccactacactgaaaattctta 267
Query: 181 aatggaagaggaattatttttcatg-gcataatattaaaatcctgcagagcccctga-aa 238
|||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||| ||
Sbjct: 266 aatggaagagaaattatttttcatgag-ataatattaaaatcctgcagagccc-tgagaa 209
Query: 239 aaagttaa 246
||| ||||
Sbjct: 208 aaacttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
