Query= MSMg01no492_f14.b1 MSMg01no492_f14.b1 CHROMAT_FILE:
MSMg01no492_f14.b1 PHD_FILE: MSMg01no492_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:33 2005
(532 letters)
>mm_chr19_28400822_28401753
Length = 932
Score = 901 bits (466), Expect = 0.0
Identities = 520/556 (93%), Gaps = 28/556 (5%)
Strand = Plus / Minus
Query: 4 acagagatggattcctaagcaacacttgtcaatgcactgccttctcctcagacctttatt 63
|||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 751 acagtgatggattcctaagcaacacttgtcaatgcactgccttctcctcattcccttatt 692
Query: 64 actctctgctttggtgggaggtgccactcactctaaaggaaggtcaggtgatccttctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 actctctgctttggtgggaggtgccactcactctaaaggaaggtcaggtgatccttctgg 632
Query: 124 gaagtgtcctcacagctcttcctgagagcatgtctcttagttgattcctcacctaatcag 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaagtgtcctcacaggtcttcctgagagcatgtctcttagttgattcctcacctaatcag 572
Query: 184 gttgacagtcaagattaaccatcacaggacctatcctgaattcccctcttttactgtatc 243
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 571 gttgacagtcaagattaaccatcacaggatctatcctgaattcccctcttttactgtatc 512
Query: 244 taattcagcttcaccttccaaatagaagctgaccacctttcaacacctcttactgcagca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 511 aaattcagcttcaccttccaaatagaagctgaccacctttcaacacctcttactacagca 452
Query: 304 aaaactcatttggagtagtgtagcaactactcccttag---------------------- 341
||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaaactcatttggagtagtgtagcaactactcccttaggagtggtgtgtgacagctgctc 392
Query: 342 ------cagttctgtctgttttcattcggtttttacatatccatagtataagacatgcat 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ccttagcagttctgtctgttttcattcggtttttacatatccatagtataagacatgcat 332
Query: 396 cttgccttcctgcttgcccatccccttagtcttgcaataaccacacaaatcaaaagctaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cttgccttcctgcttgcccatccccttagtcttgcaataaccacacaaatcaaaagctaa 272
Query: 456 agtttcatgtttctgtaggcctgtacccacttgaattctggccatttctctcaccctgtg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agtttcatgtttctgtaggcctgtacccacttgaattctggccatttctctcaccctgtg 212
Query: 516 ccacaaactcttcttg 531
||||||||||||||||
Sbjct: 211 ccacaaactcttcttg 196
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_f14.g1 MSMg01no492_f14.g1 CHROMAT_FILE:
MSMg01no492_f14.g1 PHD_FILE: MSMg01no492_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:33 2005
(448 letters)
>mm_chr19_28200967_28201814
Length = 848
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%)
Strand = Plus / Plus
Query: 1 tgtatatacaaaggcagtaagtggaaccaacttgaaggctgtggaataaaccgaccctat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtatatacaaaggcagtaagtggaaccaacttgaaggctgtggaatcaaccgaccctat 260
Query: 61 atagcagtccataacatgcagtactgccctgtgtacagttggccctctgaatccacggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagcagtccataacatgcagtactgccctgtgtacagttggccctctgaatccacggga 320
Query: 121 cccactttgtggactcaattccactggaaacacacttttgaaaacttgtatttgtgttga 180
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 321 cccactttgtggactcaattccattgaaaacacacttttgaaaacttgtatttgtgttga 380
Query: 181 gtgtctgaagactcccctggcactgctttctagacaatgcggcttaagatgatttacatt 240
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 atgtgtgaagactcccctggcactgctttctagacaatgcggtttaagatgatttacatt 440
Query: 241 gtattacttattatgaataatatagagatgatttaaaaacctatactggggcatgctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtattacttattatgaataatatagagatgatttaaaaacctatactggggcatgctaag 500
Query: 301 actttacaagggctttgagcgtcacagatccaggcatctgtggagttgctgggaccactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttacaagggctttgagcgtcacagatccaggcatctgtggagttgctgggaccactc 560
Query: 361 ttatgtatacttttagagaccattgagcttttaaagaacagggaggtgtcgctgggcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatgtatacttttagagaccattgagcttttaaagaacagggaggtgtcgctgggcatg 620
Query: 421 gtggcacacctgcaatgccagcacttaa 448
||||||||||||||||||||||||||||
Sbjct: 621 gtggcacacctgcaatgccagcacttaa 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
