Query= MSMg01no495_d06.b1 MSMg01no495_d06.b1 CHROMAT_FILE:
MSMg01no495_d06.b1 PHD_FILE: MSMg01no495_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:14 2005
(510 letters)
>mm_chr19_34346001_34346910
Length = 910
Score = 940 bits (486), Expect = 0.0
Identities = 500/510 (98%), Gaps = 9/510 (1%)
Strand = Plus / Plus
Query: 1 agttgctttaggctttgtttggtaaaaataaactccgttctcctaattaggaagcagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgctttaggctttgtttggtaaaaataaactccgttctcctaattaggaagcagttt 260
Query: 61 ttggaacctgacaaaaatcctaatgttctggggtcaggacatatgtggcatgtggccgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggaacctgacaaaaatcctaatgttctggggtcaggacatatgtggcatgtggccgct 320
Query: 121 gtttcagtaaagcttgaagttactgagagaagctggtgacgggaattcttctgaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttcagtaaagcttgaagttactgagagaagctggtgacgggaattcttctgaaaacaa 380
Query: 181 caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaagccccagagac 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 caacaacaacaacaacaacaacaacaacaacaacaacaa---------agccccagagac 431
Query: 241 tattattatttatttctatggatctaaagagtaggaagatatgctgctggttttcaagtt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tattattattgatttctatggatctaaagagtaggaagatatgctgctggttttcaagtt 491
Query: 301 attttattttatttatttactctgagaattgcgtttgtctgtgcaatgtatatttctcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 attttattttatttatttactctgagaattgcgtttgtctgtgcaatgtatatttctcac 551
Query: 361 atccccctctccctccaacttctccaagactccttcatttgttttctaactcttgtcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atccccctctccctccaacttctccaagactccttcatttgttttctaactcttgtcttc 611
Query: 421 tgctttttcgttgtaatccgctgagtccagttagcactgccaggatgcccaatatagcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgctttttcgttgtaatccgctgagtccagttagcactgccaggatgcccaatatagcat 671
Query: 481 gatcaacacccttgaagaaaactgaacctc 510
||||||||||||||||||||||||||||||
Sbjct: 672 gatcaacacccttgaagaaaactgaacctc 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_d06.g1 MSMg01no495_d06.g1 CHROMAT_FILE:
MSMg01no495_d06.g1 PHD_FILE: MSMg01no495_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:14 2005
(668 letters)
>mm_chr19_34402696_34403763
Length = 1068
Score = 795 bits (411), Expect = 0.0
Identities = 417/419 (99%)
Strand = Plus / Minus
Query: 250 tcatactgcttagcaaatgagttagaactaagtttactataatctcaacaattaggaggg 309
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1068 tcatactgcttagcaaatgagttaaaactaagtttactataatctcaacaattaggaggg 1009
Query: 310 tgaagcaggaggattactacaaatttcaggccagcctagaccacagaggaagatctcaag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 tgaagcaggaggattactacaaatttcaggccagcctagaccacagaggaagatctcaag 949
Query: 370 aaaacagggataatgaaggatagggaaagaagcagcagaaaggggagaagagggagggga 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 aaaacagggataatgaaggatagggaaagaagcagcagaaaggggagaagagggagggga 889
Query: 430 aatgggggaggagaaagagattaataaatccacattggaactcttttaagttaaattgct 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 aatgggggaggagaaagagattaataaatccacattggaactcttttaagttaaattgct 829
Query: 490 gaacaccaagaaagtgtggtaaaggaaccttcagagtctattagaggaaaagagaggagt 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gaacaccaagaaagtgtggtaaaggaaccttcagagtctattagaggaaaagagaggagt 769
Query: 550 tgcctagaaaggaatatttagaccagaagtgggcatatcattaacaatgaacacaagaat 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tgcctagaaaggaatatttagaccagaagtgggcatatcattaacaatgaacacaagaat 709
Query: 610 acaatggactgatgttctaaaagctagggagaaactacaaatactgtgcattatgtaga 668
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 acagtggactgatgttctaaaagctagggagaaactacaaatactgtgcattatgtaga 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
