Query= MSMg01no495_e03.b1 MSMg01no495_e03.b1 CHROMAT_FILE:
MSMg01no495_e03.b1 PHD_FILE: MSMg01no495_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:18 2005
(334 letters)
>mm_chr19_50247692_50248422
Length = 731
Score = 528 bits (273), Expect = e-154
Identities = 315/330 (95%), Gaps = 5/330 (1%)
Strand = Plus / Minus
Query: 6 gaattcttctcattgcgaagcacttgacctccttatcaggatgccaccatcaggttaatc 65
||||||||| || || ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 531 gaattcttcccagtgagaagcacttgacccccttatcaggatgccaccatcaggttaatc 472
Query: 66 aagtgccctctgtctatctgggagagctccaccagccttgctttcagtcttccagagagt 125
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aagtgccctctatctatctgggagagctccaccagccttgctttcagtcttccagagagt 412
Query: 126 gtgagaaggctctcnt-ttccctcagtggccttcctcaagaagatcacacccntgctatc 184
|||||||||||||| | || ||| |||||| |||||||||||||||||||| |||||||
Sbjct: 411 gtgagaaggctctcttgtt--ctccgtggcc-tcctcaagaagatcacaccc-tgctatc 356
Query: 185 ccaagactagttgctcaagtctggtccaagttctgttctcttggccctgcatcccttgct 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccaagactagtagctcaagtctggtccaagttctgttctcttggccctgcatcccttgct 296
Query: 245 tcttgatgagtcctcaggggtgacaggtatgaatatgccatgggtgaagaccaccatgct 304
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 295 tcttgatgagtcctcaggggtgacaggcatgaatatgccatgtgtgaagaccaccatgct 236
Query: 305 ctaaggaggtttcactgccttgttggagaa 334
||||||||||||||||||||||||||||||
Sbjct: 235 ctaaggaggtttcactgccttgttggagaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 731
Length adjustment: 9
Effective length of query: 325
Effective length of database: 722
Effective search space: 234650
Effective search space used: 234650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_e03.g1 MSMg01no495_e03.g1 CHROMAT_FILE:
MSMg01no495_e03.g1 PHD_FILE: MSMg01no495_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:18 2005
(626 letters)
>mm_chr19_50100908_50101932
Length = 1025
Score = 1087 bits (562), Expect = 0.0
Identities = 610/626 (97%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 ctttgtcacttttcagaagcgatccttggaggatgcagaatgggaaacaatactttcatt 60
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ctttgtcacttttcagaagtgatccttggaggatgcagactgggaaacaatactttcatt 260
Query: 61 gataaggaatgaagattgccctctcgtctttatgatgaaaatttatgagatgcagcaaga 120
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gataagaaatgaagattgccctctcgtctttatgatgaaaatttatgagacgcagcaaga 320
Query: 121 agaaaaagcaagtcagtgtattacagtgagagcctgtgaggacataacagaaaagtttcg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 agaaaaagcaagtcagtgtattacagtgagagcatgtgaggacataacagaaaagtttcg 380
Query: 181 ttttttcatgaaaagtttggtttcgggttacagtgagtgaaagttctttctgttcctgta 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttt-catgaaaagtttggtttcgggttacagtgagtgaaagttctttctgttcctgta 439
Query: 241 ctcagctgtcaagtcaggtcacaatgtctttgcttatttaaataagctgccatgtattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctcagctgtcaagtcaggtcacaatgtctttgcttatttaaataagctgccatgtattaa 499
Query: 301 ttacctggtttagacaaacgagtaccatgtaaaataatctgttagtaaaatagcttctat 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttacctggtttagacaaatgagtaccatgtaaaataatctgttagtaaaatagcttctat 559
Query: 361 cgggtctgacttcgtcaattttctacttctgcataagaaagttatcacagtacatttatt 420
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 caggtctgacttcgtcaattttctacttctgcataagaaagttatcacagtacattaatt 619
Query: 421 tactcagtcagtagatatcacacagccagatgggacttatcttggcattttgcttttggt 480
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcctcagtcggtagatatcacacagccagatgggacttatcttggcattttgcttttggt 679
Query: 481 gtcatgatgctagaatctccaagtcctataggctatgttctcatctcagtgcaggacgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 680 gtcatgatgctagaatctccaagtcctataggctatgttctcatctcagtgtaggacaga 739
Query: 541 gggaaggatcaaatttcaagctcaactaggtatttggaatattcgctctagctgtatgaa 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 740 gggaaggatcaaatttcaagctcaactaggtatttggaatattcactctagctgtatgaa 799
Query: 601 tgaggaagaacatagagctgactgtt 626
||||||||| | ||||||||||||||
Sbjct: 800 tgaggaagatcttagagctgactgtt 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
