Query= MSMg01no496_e11.b1 MSMg01no496_e11.b1 CHROMAT_FILE:
MSMg01no496_e11.b1 PHD_FILE: MSMg01no496_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:33 2005
(657 letters)
>mm_chr19_50119429_50120484
Length = 1056
Score = 1201 bits (621), Expect = 0.0
Identities = 645/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttctctctcagttttgagtaatacctttttagtagaaaaataaatgtgtgca 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcttttctcac-aagttttgagtaatacctttttagtagaaaaataaatgtgtgca 798
Query: 65 aaaggcccagagaagactcagcaactgggtttccaatatctagagccaattgtctgagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaaggcccagagaagactcagcaactgggtttccaatatctagagccaattgtctgagga 738
Query: 125 tttctgtattgtactatagattatgttaacccattagcttaaataattttacccttttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttctgtattgtactatagattatgttaacccattagcttaaataattttacccttttag 678
Query: 185 ttttattgaaaaataatgtctacccacctatcatctactgttctactgtctatcccttat 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttttattgaaagataatgtctacccacctatcatctactgttctactgtctatcccttat 618
Query: 245 ctatacatttatatagagaaagatgagagataagaatgaaaatggacatatagcaaaaaa 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 617 ctatacatttatatagagaaagatgagagagaagaatgaaaatggacatatagcaaaaaa 558
Query: 305 taaactttatttcttctcccaaatccagttaaggttttggtgtgtagctttcacaaaagc 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 taaagtttatttcttctcccaaatccagttaaggttttggtgtgtagctttcacaaaagc 498
Query: 365 ttacattacagatgctgtgggccctactatgctattttactgttagacttcgttaggttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttacattacagatgctgtgggccctactatgctattttactgttagacttcgttaggttt 438
Query: 425 ttgaacatagaacaaaacttaagtttgtataggtggataagcatatgaattttactgtac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgaacatagaacaaaacttaagtttgtataggtggataagcatatgaattttactgtac 378
Query: 485 atatagtttctgcatgtacagaatcataatgaggataaaaaaccgaaaaacccatttaca 544
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 377 atatagtttctgcatgtacagaatcataatgaggataaaaaacccaaaaacccatttaca 318
Query: 545 acttaaaaacaagaattttcttatcatacataatccttccatatagtccttttaaagtta 604
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 317 acttaaaaacaagaattttcttatcacacataatccttccatatagtccttttaaagtta 258
Query: 605 ggtcttttccttataccaatttctagctaccactgatccaatcattactgtag 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggtcttttccttataccaatttctagctaccactgatccaatcattactgtag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_e11.g1 MSMg01no496_e11.g1 CHROMAT_FILE:
MSMg01no496_e11.g1 PHD_FILE: MSMg01no496_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:33 2005
(431 letters)
>mm_chr19_49951114_49951945
Length = 832
Score = 745 bits (385), Expect = 0.0
Identities = 421/433 (97%), Gaps = 5/433 (1%)
Strand = Plus / Plus
Query: 1 taagt-aaaaaaacataattggaaaatg-aaaaaattacctgttatatttagtgcaattt 58
||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 201 taagtaaaaaaaacataattggaaaatgaaaaaaaatacctgttatatttagtgcaattt 260
Query: 59 atttaatactgtgcaacataaatatcatgtatgtgacagacattaacattaaagctatat 118
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 atttaatactgtgcaacataaatatcatgtatgtgacagacattaaaattaaagctatat 320
Query: 119 aactgttaataagtattaaaaaaaatgaattacctaaagacaaaatgttcagtattttta 178
||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aactgttaataagtatt-agaaaaatgaattacctcaagacaaaatgttcagtattttta 379
Query: 179 attggctttatataat-gtatccatagtttcataattctgtggttagactgtagtatact 237
|||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 attggctttata-aattgtatccatactttcataattctgtggttagactgtagtatact 438
Query: 238 acaggtaaaacacttcagaatggcttcaaatatggaaaaataagctatcataagcaattt 297
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaggtaaaagacttcagaatggcttcaaatatggaaaaataagctatcataagcaattt 498
Query: 298 gcagttgaagcatttagtcaacttttactggtctatgagaattaccatttaacacagagt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcagttgaagcatttagtcaacttttactggtctatgagaattaccatttaacacagagt 558
Query: 358 ataaacatagacatacttaggggccaatggtgcatgaatggcatttgagtctaaaaatgg 417
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 559 ataaacatagacatacttaggggccaatagtgcatgaatggcatttgagtctaaaaatgg 618
Query: 418 aaactctcacccc 430
|||||||||||||
Sbjct: 619 aaactctcacccc 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|