Query= MSMg01no496_g07.b1 MSMg01no496_g07.b1 CHROMAT_FILE:
MSMg01no496_g07.b1 PHD_FILE: MSMg01no496_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:42 2005
(326 letters)
>mm_chr19_55576089_55576810
Length = 722
Score = 584 bits (302), Expect = e-171
Identities = 319/326 (97%), Gaps = 4/326 (1%)
Strand = Plus / Plus
Query: 1 ttagcttccttcctcccttgtgtacctctctttcctctcccctctccccctgcttactag 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 201 ttagcttccttcctcccttgtgtacctctctttcctctcccctctcccc-tgcttactcg 259
Query: 61 tgtcttcagtaaatatttaatgtctgtgtgcacagcccagggaccaggaaatacaaacac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 tgtcttcagtaaatatttaatgtctgtgtg---agcccagggaccaggaaatacaaacac 316
Query: 121 atctttctttgcttttatggtgcttcagtgtacagagaatatgtacaccatagaaattac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atctttctttgcttttatggtgcttcagtgtacagagaatatgtacaccatagaaattaa 376
Query: 181 ctcattctcagggaaagtgcttcagccctccacctctgactcttccttgcagattcccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctcattctcagggaaagtgcttcagccctccacctctgactcttccttgcagattcccaa 436
Query: 241 gagactccagaagcaccaacagccagaaaaagataaattagggaaatagaatatggtgcg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 gagactccagaagcaccaacagccagaaaaagataaattagggaaatagaatatggtgtg 496
Query: 301 tttaatcataaactaaaaatgttatg 326
||||||||||||||||||||||||||
Sbjct: 497 tttaatcataaactaaaaatgttatg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 722
Length adjustment: 9
Effective length of query: 317
Effective length of database: 713
Effective search space: 226021
Effective search space used: 226021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_g07.g1 MSMg01no496_g07.g1 CHROMAT_FILE:
MSMg01no496_g07.g1 PHD_FILE: MSMg01no496_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:42 2005
(347 letters)
>mm_chr19_55673605_55674351
Length = 747
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%)
Strand = Plus / Minus
Query: 1 ttgcaagtcactaaagctggggcctctggttctacagctgcctttgtggggaaggggcct 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttgcaagtcactaaagccggggcctctggttctacagctgcctttgtggggaaggggcct 488
Query: 61 ctgggtctcagccaagtttagctactgcctctgggaaggaatccaggggtcccttatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctgggtctcagccaagtttagctactgcctctgggaaggaatccaggggtcccttatccc 428
Query: 121 cacctactgcactggggtcctctgccttttccccttcctttctccttgctagggccttgc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 427 cacctactgcactggggtcctctgcctttttcccttcctttctccttgctagggccttgc 368
Query: 181 ttagttacagcacgggcatttgtggggaaacatgactggctgtgctgacattcggaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttagttacagcacgggcatttgtggggaaacatgactggctgtgctgacattcggaggca 308
Query: 241 tagagggctttttctgtataagtttacagtggagaacaatgaaaagactgaaggccatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 307 tagagggctttttctgtataagtttacagtggagaacaatgaaaagactgaaggccaaag 248
Query: 301 ccaacgggggccaagggagctgcctacatgttgggctttgccatgac 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccaacgggggccaagggagctgcctacatgttgggctttgccatgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
