XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTCATTC
CCGTAACTTAAAATACGTAGAGACAGCTATAACCAGGATAAATTCTTTTT
GCTCCTTACATCCTTGGCAACCTCTGAGGTATGATTTGAGCCATCTCTTC
ATTAGGAATTCAACAAGACCAACTTTCTCATTACGTGGGGCAGCACACTG
AGTAATAGGAAATCTGGCTTGGCTACAGTATCGTGCACAACGGCCATGGT
CAATAAACATTTATTGAATGACTGTCTTGTTACCAAGACTCTGCAGCATA
GTGGCTTCAGTTTGACCATCTGCTTGAGTGGGATGCCTGTGACAATAATG
GTTCATACTGGGTGCATGTTCTCCAGTGCCCAAAATTCAAGAGAGATCAA
CACACACCCTCCATCAGAATATGCAGCCGTGTCTGCAAGGCAACTGCATG
TCAAATTGAGGTGCAGAGAGGTAGCTATTTTTGCCTGACACCAGGGACAC
TCAGGAATGTATGGACGATGCTGTCACAACTGGACTTTTCCCCTGGAGAA
GCCTTAGTCGAAACTGATATCCTTCTATAGCAAGTTGTGACAAGATGGCT
ACTCCATAGTCCATCTCTTGTCACCTAATTTCTGCCCATCAGTTCTCACT
GCCGAGTGACTTTTCCCTAGCTCACATGAGAAGGTACAGGTAGGAAGTCA
GAAAACACAGGTCAAGAGCTGCT

CGATGCAGTGGGAGGCCTGGNGGCTGCCTGGTTCAAACAGGGGGTGAACT
ATANAAGGTTCGCAAAATAGGGGCNGAGCGAACCAACAGGACAGCCCAGC
AAGTTGAAACTGGACTAGGCCTAATTTGGAAAGTCCAGAGATGGGAATAT
TTCTACGAAGAAAGAAAAGCTAGTGTGCAAATGACCTCATTTTTAAAACA
TATAAGGGATGTGCTGTACTTGCCTAAAAAAAGATTTACAGGTGGCTATG
GTTCTTGGAAGAAGATACCTTGTGTCCCAGCCATGGAAGAAGATACTTTG
TGTCCCAGCCATGGAATATTATCTTTCACACACATACACACAGAAAGAGA
GAGATAAATATAAAGGAAAATCTAAGCCATGCTATAACACAGAAGAATCT
TGAGAACACTATACTAAGTGCAATGATGCAGTTACAAAAGGAGAAACTCT
GTATGATGTCATAGATATGCGAGACCTAGAACAGGTAGGATTCATAGAGA
GCAAAGTGACTAAGAGGGCGAGAATAAGCTTAGTTAATGGAGTTTTTGCA
TGGTAGAGAGTTCCCGAAATAGGTCAGAATGATTGCACGATCATTTGGAT
ATATTAAATGCTACTAGAATGCATCTAANAATGATCTAAATGGTCTGATT
TACATTGCGTATTTTGTACTATAATTACCAAGGGGAAAAGTATAAGATAT
TCTCTACAATCTTATGGACTCTAAAAAAAAACCGATAAAGAAAAAG

Query= MSMg01no501_m07.b1 MSMg01no501_m07.b1 CHROMAT_FILE:
MSMg01no501_m07.b1 PHD_FILE: MSMg01no501_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:39 2005
         (569 letters)



>mm_chr19_58093709_58094677
          Length = 969

 Score = 1046 bits (541), Expect = 0.0
 Identities = 562/569 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtagagacagctataaccaggataaattctttttgctccttacatccttggcaacctctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtagagacagctataaccaggataaattctttttgctccttacatccttggcaacctctg 260

                                                                       
Query: 61  aggtatgatttgagccatctcttcattaggaattcaacaagaccaactttctcattacgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtatgatttgagccatctcttcattaggaattcaacaagaccaactttctcattacgt 320

                                                                       
Query: 121 ggggcagcacactgagtaataggaaatctggcttggctacagtatcgtgcacaacggcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggcagcacactgagtaataggaaatctggcttggctacagtatcgtgcacaacggcca 380

                                                                       
Query: 181 tggtcaataaacatttattgaatgactgtcttgttaccaagactctgcagcatagtggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tggtcaataaacatttattgaatgactgtcttgttaccaagactctgcagcatagcggct 440

                                                                       
Query: 241 tcagtttgaccatctgcttgagtgggatgcctgtgacaataatggttcatactgggtgca 300
           |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtccgaccatctgcttgattgggatgcctgtgacaataatggttcatactgggtgca 500

                                                                       
Query: 301 tgttctccagtgcccaaaattcaagagagatcaacacacaccctccatcagaatatgcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttctccagtgcccaaaattcaagagagatcaacacacaccctccatcagaatatgcag 560

                                                                       
Query: 361 ccgtgtctgcaaggcaactgcatgtcaaattgaggtgcagagaggtagctatttttgcct 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 ccgtgtctgcaaggcaactgcatgtcaaattgaggtgcggagaggtagctatttttgcct 620

                                                                       
Query: 421 gacaccagggacactcaggaatgtatggacgatgctgtcacaactggacttttcccctgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacaccagggacactcaggaatgtatggacgatgctgtcacaactggacttttcccctgg 680

                                                                       
Query: 481 agaagccttagtcgaaactgatatccttctatagcaagttgtgacaagatggctactcca 540
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaagccttagtcaaaactgatgtccttctatagcaagttgtgacaagatggctactcca 740

                                        
Query: 541 tagtccatctcttgtcacctaatttctgc 569
           |||||||||||||||||||||||||||||
Sbjct: 741 tagtccatctcttgtcacctaatttctgc 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no501_m07.g1 MSMg01no501_m07.g1 CHROMAT_FILE:
MSMg01no501_m07.g1 PHD_FILE: MSMg01no501_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:39 2005
         (300 letters)



>mm_chr19_58262402_58263101
          Length = 700

 Score =  572 bits (296), Expect = e-168
 Identities = 299/300 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acacacatacacacagaaagagagagataaatataaaggaaaatctaagccatgctataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 acacacatacacacagaaagagagagataaatataaaggaaaatctaagccatgctataa 614

                                                                       
Query: 61  cacagaagaatcttgagaacactatactaagtgcaatgatgcagttacaaaaggagaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cacagaagaatcttgagaacactatactaagtgcaatgatgcagttacaaaaggagaaac 554

                                                                       
Query: 121 tctgtatgatgtcatagatatgcgagacctagaacaggtaggattcatagagagcaaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tctgtatgatgtcatagatatgcgagacctagaacaggtaggattcatagagagcaaagt 494

                                                                       
Query: 181 gactaagagggcgagaataagcttagttaatggagtttttgcatggtagagagttcccga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 493 gactaagagggcgagaataagcttagttaatggagtttttgcatggtagagagttccgga 434

                                                                       
Query: 241 aataggtcagaatgattgcacgatcatttggatatattaaatgctactagaatgcatcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aataggtcagaatgattgcacgatcatttggatatattaaatgctactagaatgcatcta 374


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space:   201081
Effective search space used:   201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)