Query= MSMg01no503_p16.b1 MSMg01no503_p16.b1 CHROMAT_FILE:
MSMg01no503_p16.b1 PHD_FILE: MSMg01no503_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:25 2005
(352 letters)
>mm_chr19_26127802_26128555
Length = 754
Score = 661 bits (342), Expect = 0.0
Identities = 349/352 (99%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 1 ggtgggctgttatgtagaagtgtaagctgaaataatgccttttatctctaaaatgatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtgggctgttatgtagaagtgtaagctgaaataatgccttttatctctaaaatgatttt 260
Query: 61 gtagatatgcacccccc--cacacacacatacacaatggaatcacaaaccagagcacaca 118
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gtagatatgcacccccccacacacacacatacacaatggaatcacaaaccagagctcaca 320
Query: 119 ggaacaaacttccaagtgagattcagatgatatggtaagttggggaaaatactagcagct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaacaaacttccaagtgagattcagatgatatggtaagttggggaaaatactagcagct 380
Query: 179 taggcagagacagggccagtggaaaaggcctcttgtttgtacaggcaagtggcctaggta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggcagagacagggccagtggaaaaggcctcttgtttgtacaggcaagtggcctaggta 440
Query: 239 atgtgtgtttctttccccattttgatgtttcatggagagagactatatatcccatttaag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgtgtttctttccccattttgatgtttcatggagagagactatatatcccatttaag 500
Query: 299 aattgcatttacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgcatttacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 754
Length adjustment: 9
Effective length of query: 343
Effective length of database: 745
Effective search space: 255535
Effective search space used: 255535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_p16.g1 MSMg01no503_p16.g1 CHROMAT_FILE:
MSMg01no503_p16.g1 PHD_FILE: MSMg01no503_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:25 2005
(544 letters)
>mm_chr19_26233024_26233966
Length = 943
Score = 830 bits (429), Expect = 0.0
Identities = 447/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 1 atatcaaagaaagttaaaagaaatgagtgattactattaaatacaataaattaaaagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atatcaaagaaagttaaaagaaatgagtgattactattaaatacaataaattaaaagcat 393
Query: 61 attaaaactacaaattacatatatgatggactcaacacaaaacctaagaaaaagagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attaaaactacaaattacatatatgatggactcaacacaaaacctaagaaaaagagattt 333
Query: 121 aaaggggagaatatttctatccatgttaccgtcttatgtctaaaaattacaaatactaca 180
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 332 aaaggggagaatatttctatccatgtta-catcttatgtctaaaaattacaaatactaca 274
Query: 181 acaaaatactgctttagaatatggagcaaatatttataaagatacagaagaaatcaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acaaaatactgctttagaatatggagcaaatatttataaagatacagaagaaatcaacac 214
Query: 241 aaaactttatcaatatctgaaacaaattaagaaaataacctcatatagaataatagaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaaactttatcaatatctgaaacaaattaagaaaataacctcatatagaataatagaaat 154
Query: 301 aaataagataaagtaaaagaataaatttaaccaagaatgtacagaaattttatatatact 360
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 153 aaataagataaagtaaaagaataaatttaaccaaggatgtatagaaattttatatatatt 94
Query: 361 tatggaaactataaaatatcaatgaaagaaattgaaaataaacataaatggaaagatatt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tatggaaactataaaatatcaatgaaagaaattgaaaataaacataaatggaaagatatc 34
Query: 421 catgaccataacttgaaagaacattgttaaaat 453
|||||||||||||||||||||||||||||||||
Sbjct: 33 catgaccataacttgaaagaacattgttaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
