AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCACAGTGTTTTACCTACATCTGCCTTCCTATTTTCAGCCCAACTCT
TTGATCCTCCCTAGAAACTTAACAGCTTATGAACTAAGAAAATATTTGAA
CATTTTAAAAAGCGCTTCTTGGCCATTTGAGATTCCTCTGTTGAGAGTTC
TCTGTTACATTCTCTACCTCATATTTTAATTGGGATATTTGGGTTATTGA
TGTCTAATTTCTTGAGCTCTTTATAAATTTTGGATATTAGCCCTCTGTCA
GATGTAGGATTGGTGGAGATCCCGTCCCAATCTGTGTAGGCTGCAGATTT
TTCCTATTGACAGTGTCCTTTGCCTTACAGAAGATTTGCAGCTTCATGAG
GTCCTATATAGCAATTGTTGACCTTAGAACCTAGGCCATTGGTGATCTGC
TCAGAAACTTGTCTCCTGTACTTACTCCTTACTCCTGCATTCAATGGTAT
CTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT
TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTCTTC
TCTTCTCTTCTCCTCTCCTTTCCTTTCTTTTCTTTTCTTTTCTTTTTTTT
TGGGGGGGGGGGGTTCCAGACTCGGTTTCTCTGTATAGCGCTGGCTGTCC
TGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCTTG
CCTCTGCCTCC

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGAAATCTGAATGGTTTTGGTTTCTAAT
CTAATATGATGGTGTCTGTGGACACAGAGACAGACATGAAGCAGGGCAAA
TCTAATGTCACTCTGTGCCATCTAGGGTAGTGGTAGAAGAGAGGACTGGA
TGTCTGTATTAAAATTGTAACACAACACATATCTGTTGCTTTAGCTACAC
AGTTTGATGACACTCCAGTTATCCTTAGGAAACAAATATAACATTGTTAT
TTGGATCATTTTTTAATTAAAAAAGCAATATATATAGAACTTTAAATAGA
AAATCTAGATAGGAAAATTATACGATTTTATAGTCTCTTAAATATAGCAT
CTAGAAACAAGGTTGAGATACTACTAACTTAAAACTGAACAAAAACAGCA
GCATCAGTGTTTTGTGGGGGCATTCAGAATGATAATTTATCTTCAGCAGA
TAAAAATGATAAAAAGCATTCAGAGTTGGTCCATTAACTCTGAACCCAAA
ATGTCTCTGTGAAATTTATGAATATCACTAGAGTTCCTGAGCATTTTAAT
CCTGATTTTAGATGCTGAGGTGGCTCTAATGTAAGTCAAGTTTCAAACAG
CCAGCTCATTGGTAAGTGTACAGCCACAGAACTTGAAAGATTTTATTTGT
TCTCAAGAATTGTAAGAGCCTCATTTAACAACATATGTGGTCAGTTAAAT
GAGTCAAGAGTTTTTTGN

Query= MSMg01no506_m20.g1 MSMg01no506_m20.g1 CHROMAT_FILE:
MSMg01no506_m20.g1 PHD_FILE: MSMg01no506_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:07 2005
         (688 letters)



>mm_chr19_20381867_20382955
          Length = 1089

 Score = 1263 bits (653), Expect = 0.0
 Identities = 680/689 (98%), Gaps = 1/689 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaaatctgaatggttttggtttctaatctaatatgatggtgtctgtggacacagagaca 60
           |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tgaaatcttaatggtattggtttctaatctaatatgatggtgtctgtggacacagagaca 830

                                                                       
Query: 61  gacatgaagcagggcaaatctaatgtcactctgtgccatctagggtagtggtagaagaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gacatgaagcagggcaaatctaatgtcactctgtgccatctagggtagtggtagaagaga 770

                                                                       
Query: 121 ggactggatgtctgtattaaaattgtaacacaacacatatctgttgctttagctacacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ggactggatgtctgtattaaaattgtaacacaacacatatctgttgctttagctacacag 710

                                                                       
Query: 181 tttgatgacactccagttatccttaggaaacaaatataacattgttatttggatcatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tttgatgacactccagttatccttaggaaacaaatataacattgttatttggatcatttt 650

                                                                       
Query: 241 ttaattaaaaaagcaatatatatagaactttaaatagaaaatctagataggaaaattata 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 649 ttaattaaaaaagcaatatatatagaactttaaatagataatctagataggaaaattata 590

                                                                       
Query: 301 cgattttatagtctcttaaatatagcatctagaaacaaggttgagatactactaacttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cgattttatagtctcttaaatatagcatctagaaacaaggttgagatactactaacttaa 530

                                                                       
Query: 361 aactgaacaaaaacagcagcatcagtgttttgtgggggcattcagaatgataatttatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aactgaacaaaaacagcagcatcagtgttttgtgggggcattcagaatgataatttatct 470

                                                                       
Query: 421 tcagcagataaaaatgataaaaagcattcagagttggtccattaactctgaacccaaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcagcagataaaaatgataaaaagcattcagagttggtccattaactctgaacccaaaat 410

                                                                       
Query: 481 gtctctgtgaaatttatgaatatcactagagttcctgagcattttaatcctgattttaga 540
           ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 409 gtctctgtgaaatttatgaatatcactagagttcctgagcactctgatcctgattttaga 350

                                                                       
Query: 541 tgctgaggtggctctaatgtaagtcaagtttcaaacagccagctcattggtaagtgtaca 600
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 349 tgctgaggtggctctaatgtaagtcaagtttcaaacagccagctcactggtaagtttaca 290

                                                                       
Query: 601 gccacagaacttgaaagattttatttgttctcaagaattgtaagagcctcattt-aacaa 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 289 gccacagaacttgaaagattttatttgttctcaagaattgtaagagcctcatttaaacaa 230

                                        
Query: 660 catatgtggtcagttaaatgagtcaagag 688
           |||||||||||||||||||||||||||||
Sbjct: 229 catatgtggtcagttaaatgagtcaagag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space:   731562
Effective search space used:   731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)