Query= MSMg01no520_e15.b1 MSMg01no520_e15.b1 CHROMAT_FILE:
MSMg01no520_e15.b1 PHD_FILE: MSMg01no520_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:18 2005
(670 letters)
>mm_chr19_42868903_42869972
Length = 1070
Score = 890 bits (460), Expect = 0.0
Identities = 472/476 (99%)
Strand = Plus / Minus
Query: 5 gaattcagcttctggacttgcggtctgttgtccccccctctcaattgtagttctgacttt 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 476 gaattcagcttctggacttgcggtctgttgtccccccttctcaattgtagttctgacttt 417
Query: 65 aatgtttcttgtaatataagctgtatcagatgtggatagataagagaataaagaacgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aatgtttcttgtaatataagctgtatcagatgtggatagataagagaataaagaacgtga 357
Query: 125 tggtcatcagccctcctatcaggggtgaggacaagcagacagaatttcacgatccaagtc 184
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 356 tggtcatcagccctcctatcaggggtgaggacaagcagacagaattttacaatccaagtc 297
Query: 185 caggcccaagaagtgcaaggaattatgggacactttcgaggggcacttgtacatgatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 caggcccaagaagtgcaaggaattatgggacactttcgaggggcacttgtacatgatata 237
Query: 245 aagaacaagcaagaccatcaagaaaagagtcaggggctggagagagaattcagcagttaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aagaacaagcaagaccatcaagaaaagagtcaggggctggagagagaattcagcagttaa 177
Query: 305 gaacaggttctgttcttgcagaggacccagtttgattcccagcacgcacgctgagtagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gaacaggttctgttcttgcagaggacccagtttgattcccagcacgcacgctgagtagtt 117
Query: 365 tccaatctcctgtagccctggctccagggactccaatgccctcttctggcctccataggg 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 116 tccaatctcctgtagccctggctccggggactccaatgccctcttctggcctccataggg 57
Query: 425 gctgcattagtgtgtaaatatcaccccctccatgcacgcaaaaattgaaaatcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gctgcattagtgtgtaaatatcaccccctccatgcacgcaaaaattgaaaatcagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_e15.g1 MSMg01no520_e15.g1 CHROMAT_FILE:
MSMg01no520_e15.g1 PHD_FILE: MSMg01no520_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:18 2005
(562 letters)
>mm_chr19_42686178_42687140
Length = 963
Score = 1073 bits (555), Expect = 0.0
Identities = 561/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 1 aaacaggccacctggctacagtctgggctctcattgattgatcgatgttggatgagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacaggccacctggctacagtctgggctctcattgattgatcgatgttggatgagggag 260
Query: 61 agagagggagggtgaatggaactctaccttgtcactggctatatgactcaggctgaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagggagggtgaatggaactctaccttgtcactggctatatgactcaggctgaagtg 320
Query: 121 caagggcactggagtgaagtctgaagacacaggcacctgccctggccaggagggaaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagggcactggagtgaagtctgaagacacaggcacctgccctggccaggagggaaggct 380
Query: 181 gcgagaggatgattgcccaggattcctagaggttt-gggggggggggcggctatcctgag 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gcgagaggatgattgcccaggattcctagaggtttggggggggggggcggctatcctgag 440
Query: 240 aggctagctgtgggtcactcctagtcctttttctgtgactctctgggccttggtctaggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctagctgtgggtcactcctagtcctttttctgtgactctctgggccttggtctaggc 500
Query: 300 cctgtacccttgtggcatcgttcctgtggttagagcagagcctacaaataggctcccacc 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtacccttatggcatcgttcctgtggttagagcagagcctacaaataggctcccacc 560
Query: 360 tatatagggctggggaaggtggggtttgaagccctctgcctccaaaccctctttcacatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatatagggctggggaaggtggggtttgaagccctctgcctccaaaccctctttcacatc 620
Query: 420 atctccagcagtcagctctatgtagaggggagcccagctctgctccagctcttagtgccc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctccagcagtcagctctatgtagaggggagcccagctctgctccagctcttagtgccc 680
Query: 480 cgagtcacaggagagacatctagttctattttactccgtccccagcattctttcagggtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cgagtcacaggagagacatctagttctattttactccgtccccagcattctttcagggtg 740
Query: 540 agaaatggttacacacagtgtgt 562
|||||||||||||||||||||||
Sbjct: 741 agaaatggttacacacagtgtgt 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 963
Length adjustment: 10
Effective length of query: 552
Effective length of database: 953
Effective search space: 526056
Effective search space used: 526056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
