Query= MSMg01no522_b24.b1 MSMg01no522_b24.b1 CHROMAT_FILE:
MSMg01no522_b24.b1 PHD_FILE: MSMg01no522_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:39 2005
(572 letters)
>mm_chr19_30822166_30823137
Length = 972
Score = 824 bits (426), Expect = 0.0
Identities = 435/438 (99%)
Strand = Plus / Minus
Query: 135 tctgcccagtcattgtgtaatcagtatttattgacaagagaaaacataaatggtgagaat 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tctgcccagtcattgtgtaatcagtatttattgacaagagaaaacataaatggtgagaat 913
Query: 195 tgtttacacaaacttgagccaggagattctagacagaagcatttcagtatcaagtctgga 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 tgtttacacaaacttgagccaggagattctagacagaagcatttcagtatcaagtctgga 853
Query: 255 ttgaaccaagatatgaggacagagaaatctgcatctgaacaacacaaggataaccagtac 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ttgaaccaagatatgaggacagagaaatctgcatctgaacaacacaaggataaccagtac 793
Query: 315 acaaaaacattatgcttataaagatcatcaacatctgtagtagaaatttttagttatagg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 acaaaaacattatgcttataaagatcatcaacatctgtagtagaaatttttagttatagg 733
Query: 375 agtttgtagttgtgtgcttgtttctcttgaagatacaagaggaaattgtgagatcaacat 434
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 732 agtttgtagttgtgtgcttgtttcttttgaagatacaagaggaaattgtgagatcaacat 673
Query: 435 ttctgaaaaatccccaaactacactgtgctttgagtgtgtttttaagtaaattatgaaaa 494
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 672 ttctgaaaaatccccaaactacactgtgctttgagtgtgtctttaagtaaattatgaaaa 613
Query: 495 ggtagcttttaggcacactttagtaacaaattactcacaacactggtgttttcatgttaa 554
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggtagcttttagccacactttagtaacaaattactcacaacactggtgttttcatgttaa 553
Query: 555 tgtatgtgtcattcagaa 572
||||||||||||||||||
Sbjct: 552 tgtatgtgtcattcagaa 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_b24.g1 MSMg01no522_b24.g1 CHROMAT_FILE:
MSMg01no522_b24.g1 PHD_FILE: MSMg01no522_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:39 2005
(526 letters)
>mm_chr19_30670433_30671359
Length = 927
Score = 412 bits (213), Expect = e-119
Identities = 219/221 (99%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 1 agtctgagaagggttaatatgttaggaaaccagcagacacagcaaacagtgcggtttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctgagaagggttaatatgttaggaaaccagcagacacagcaaacagtgcggtttgtg 260
Query: 61 tttgtgaatctatgtgaccagttat-ggggggggggaagcataccgtgaaaacagttaca 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgaatctatgtgaccagttataggggggggggaagcataccgtgaaaacagttaca 320
Query: 120 acagccaaagacccccaagtttgcctctttgtgaaactccttaaaatgatagattgctag 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 acagccaaagacccccaagtttgcctctttgtgaaactccttaaaacgatagattgctag 380
Query: 180 agtacaaatgacttcagttgtagttcataataaaaaaaaaa 220
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtacaaatgacttcagttgtagttcataataaaaaaaaaa 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 927
Length adjustment: 10
Effective length of query: 516
Effective length of database: 917
Effective search space: 473172
Effective search space used: 473172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
