Query= MSMg01no523_d22.b1 MSMg01no523_d22.b1 CHROMAT_FILE:
MSMg01no523_d22.b1 PHD_FILE: MSMg01no523_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:06 2005
(641 letters)
>mm_chr19_7748467_7749513
Length = 1047
Score = 1176 bits (608), Expect = 0.0
Identities = 632/644 (98%), Gaps = 10/644 (1%)
Strand = Plus / Plus
Query: 7 gaattctcatttatcttcctcaacaaagtcctctaaggggaaggtagaggttttactcac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcatttatcttcctcaacaaagtcctctaaggggaaggtagaggttttactcac 266
Query: 67 ttattttctatatcttggattgagtcaggcagaggctgattcttggtctcaggaagaaga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttattttctatatcttggattgagtcaggcagaggctgattcttggtctcaggaagaaga 326
Query: 127 agggcaacgaggccaccaaggaagggaagaatcccatagatgatccagggcaaggaagca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agggcaacgaggccaccaaggaagggaagaatcccatagatgatccagggcaaggaagca 386
Query: 187 gagtatgtcgtgaggatcataagtagaggagacagcgctcctccagcactgccagcaatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gagtatgtcgtgaggatcataagtagaggagacagcgctcctccagcactgccagcaatt 446
Query: 247 ccaacgactcctaaagcagttgcccttggagcataaagcattaatcagaagtaatctagc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccaacgactcctaaagcagttgcccttggagcataaagcattaatcagaagtaatctagc 506
Query: 307 aatttcacacacatagaatttgtgactttatatctcacattaattacaagtcaatgagct 366
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 507 aatttcacacacatagaatttgtgactttatatctcacactaattacaagtcaatgagct 566
Query: 367 gtgtaattgaacttagggatgatggtgacttatttttaccattcaaacttctgttttatt 426
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgtaattga-cttagggatgatggtgacttatttttaccattcaaacttctgttttatt 625
Query: 427 tggtgttatatttttgtcaaggacagagtattaaggcacttgtttattacttatttt--- 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tggtgttatatttttgtcaaggacagagtattaaggcacttgtttattacttattttatt 685
Query: 484 ----tttttagttttatttatgtatcttttctttttttt-ctttttttt-ccatttttta 537
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 686 tttttttttagttttatttatgtatcttttctttttttttctttttttttccatttttta 745
Query: 538 ttaggtatttaactcatttacatttccaatgctataccaaaagtcccccatatccaccca 597
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttaggtatttaactcatttatatttccaatgctataccaaaagtcccccatatccaccca 805
Query: 598 cccccactcccctgcccacccactccccctttttggccctggtg 641
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 cccccactcccctgcccacccactccccctttttggccctggtg 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1047
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1037
Effective search space: 654347
Effective search space used: 654347
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_d22.g1 MSMg01no523_d22.g1 CHROMAT_FILE:
MSMg01no523_d22.g1 PHD_FILE: MSMg01no523_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:06 2005
(624 letters)
>mm_chr19_7876131_7877150
Length = 1020
Score = 694 bits (359), Expect = 0.0
Identities = 368/373 (98%), Gaps = 4/373 (1%)
Strand = Plus / Minus
Query: 1 attacaatagttaggcaatagcacaaatagtgtgtatgctttgaaattactcattgcttt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attacaatagttaagcaatagcacaaatagtgtgtatgctttgaaattactcattgcttt 310
Query: 61 attaaatacaagagtcatgttcaatgattcaaatgacttcatatataaaataaagattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 309 attaaatacaagagtcatgttcaatgattcaaatgacttcatatataaaat----attta 254
Query: 121 cttttccagttatttcattcaagagatgacctcagattaaatcacagttcagaaatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttttccagttatttcattcaagagatgacctcagattaaatcacagttcagaaatttga 194
Query: 181 caacaggaccattcattaaaatagcaaaagtatatcccacccaaaggacttacctttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 caacaggaccattcattaaaatagcaaaagtatatcccacccaaaggacttacctttaag 134
Query: 241 ctaaggccatagaagtagttttacaatattaggcatgactttcttctctgaaacaggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctaaggccatagaagtagttttacaatattaggcatgactttcttctctgaaacaggctt 74
Query: 301 caaatccaatcagaaatgattggtattcctttaacagttatatcattaatacataaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 caaatccaatcagaaatgattggtattcctttaacagttatatcattaatacataaatgg 14
Query: 361 ccaacttctcatg 373
|||||||||||||
Sbjct: 13 ccaacttctcatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1020
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1010
Effective search space: 620140
Effective search space used: 620140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
